Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM54Q969K7 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM54Q969K7 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM54Q969K7 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.72□□□□□ -0.37
TMEM54Q969K7 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM54Q969K7 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM54Q969K7 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM54Q969K7 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM54Q969K7 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC12.72□□□□□ -0.37
TMEM54Q969K7 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM54Q969K7 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TMEM54Q969K7 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM54Q969K7 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM54Q969K7 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM54Q969K7 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TMEM54Q969K7 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
TMEM54Q969K7 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM54Q969K7 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM54Q969K7 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM54Q969K7 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.72□□□□□ -0.37
TMEM54Q969K7 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.72□□□□□ -0.37
TMEM54Q969K7 AC104306.2-201ENST00000451877 341 ntBASIC12.72□□□□□ -0.37
TMEM54Q969K7 PFN1P12-201ENST00000455938 534 ntBASIC12.72□□□□□ -0.37
TMEM54Q969K7 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.72□□□□□ -0.37
TMEM54Q969K7 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.72□□□□□ -0.37
TMEM54Q969K7 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.72□□□□□ -0.37
TMEM54Q969K7 AC009779.1-201ENST00000551138 283 ntBASIC12.72□□□□□ -0.37
TMEM54Q969K7 AL512310.5-201ENST00000551999 515 ntBASIC12.72□□□□□ -0.37
TMEM54Q969K7 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.72□□□□□ -0.37
TMEM54Q969K7 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM54Q969K7 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.72□□□□□ -0.37
TMEM54Q969K7 AL132994.2-201ENST00000603120 687 ntBASIC12.72□□□□□ -0.37
TMEM54Q969K7 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
TMEM54Q969K7 AL008638.5-201ENST00000623814 1298 ntBASIC12.72□□□□□ -0.37
TMEM54Q969K7 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM54Q969K7 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TMEM54Q969K7 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TMEM54Q969K7 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM54Q969K7 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM54Q969K7 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.72□□□□□ -0.37
TMEM54Q969K7 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM54Q969K7 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM54Q969K7 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM54Q969K7 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM54Q969K7 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM54Q969K7 AL157996.1-201ENST00000624684 2299 ntBASIC12.72□□□□□ -0.37
TMEM54Q969K7 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM54Q969K7 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.72□□□□□ -0.37
TMEM54Q969K7 AC007952.5-201ENST00000572818 1486 ntBASIC12.72□□□□□ -0.37
TMEM54Q969K7 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TMEM54Q969K7 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.72□□□□□ -0.37
TMEM54Q969K7 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM54Q969K7 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM54Q969K7 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.71□□□□□ -0.37
TMEM54Q969K7 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM54Q969K7 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM54Q969K7 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM54Q969K7 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM54Q969K7 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM54Q969K7 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM54Q969K7 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM54Q969K7 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM54Q969K7 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.71□□□□□ -0.37
TMEM54Q969K7 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
TMEM54Q969K7 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM54Q969K7 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM54Q969K7 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM54Q969K7 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
TMEM54Q969K7 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM54Q969K7 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC12.71□□□□□ -0.37
TMEM54Q969K7 CSH2-202ENST00000345366 598 ntTSL 5 BASIC12.71□□□□□ -0.37
TMEM54Q969K7 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM54Q969K7 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM54Q969K7 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.71□□□□□ -0.37
TMEM54Q969K7 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC12.71□□□□□ -0.37
TMEM54Q969K7 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.71□□□□□ -0.37
TMEM54Q969K7 AC005740.2-201ENST00000511085 419 ntBASIC12.71□□□□□ -0.37
TMEM54Q969K7 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.71□□□□□ -0.37
TMEM54Q969K7 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.71□□□□□ -0.37
TMEM54Q969K7 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.71□□□□□ -0.37
TMEM54Q969K7 CSH2-206ENST00000560142 749 ntTSL 5 BASIC12.71□□□□□ -0.37
TMEM54Q969K7 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.71□□□□□ -0.37
TMEM54Q969K7 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
TMEM54Q969K7 AP002353.1-201ENST00000528257 1599 ntBASIC12.71□□□□□ -0.37
TMEM54Q969K7 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.71□□□□□ -0.37
TMEM54Q969K7 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.71□□□□□ -0.37
TMEM54Q969K7 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM54Q969K7 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM54Q969K7 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.71□□□□□ -0.37
TMEM54Q969K7 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM54Q969K7 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM54Q969K7 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TMEM54Q969K7 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TMEM54Q969K7 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TMEM54Q969K7 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.71□□□□□ -0.38
TMEM54Q969K7 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
TMEM54Q969K7 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.71□□□□□ -0.38
TMEM54Q969K7 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TMEM54Q969K7 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.71□□□□□ -0.38
TMEM54Q969K7 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms