Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 PCDHA5-203ENST00000614258 4248 ntBASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 FO681548.1-201ENST00000455617 1132 ntBASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 AC027237.1-201ENST00000560942 655 ntBASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 AC005586.2-201ENST00000563946 837 ntBASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 GOLGA2P5-201ENST00000266746 2395 ntBASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 LINC00567-201ENST00000569854 3409 ntBASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CKAP2Q8WWK9 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 GHET1-201ENST00000627071 1906 ntBASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 ARSEP1-201ENST00000420443 635 ntBASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 AP006288.1-201ENST00000446065 395 ntBASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 DNAJB3-202ENST00000449667 1266 ntBASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 SNHG9-202ENST00000564014 471 ntBASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 AP001160.2-201ENST00000596071 487 ntBASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 AC138696.2-201ENST00000607376 223 ntBASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 AC007431.3-201ENST00000623221 587 ntBASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms