Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 LYPLA2P1-203ENST00000447689 696 ntBASIC14.49□□□□□ -0.09
HMGB4Q8WW32 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 AC021016.3-201ENST00000608367 477 ntBASIC14.49□□□□□ -0.09
HMGB4Q8WW32 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 AC127024.7-201ENST00000625101 200 ntBASIC14.49□□□□□ -0.09
HMGB4Q8WW32 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 IL9RP3-201ENST00000442856 1674 ntBASIC14.49□□□□□ -0.09
HMGB4Q8WW32 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.49□□□□□ -0.09
HMGB4Q8WW32 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 RPL18AP8-201ENST00000486071 528 ntBASIC14.48□□□□□ -0.09
HMGB4Q8WW32 AL157792.1-201ENST00000488281 530 ntBASIC14.48□□□□□ -0.09
HMGB4Q8WW32 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 AC140658.4-201ENST00000561990 352 ntBASIC14.48□□□□□ -0.09
HMGB4Q8WW32 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms