Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 AL136295.7-201ENST00000619226 1200 ntBASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 AC022748.3-201ENST00000621828 275 ntBASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 KRT8P28-201ENST00000433288 1390 ntBASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 GPAA1P2-201ENST00000417923 928 ntBASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 AL157407.1-201ENST00000435784 904 ntBASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 AC005740.2-201ENST00000511085 419 ntBASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 RN7SL163P-201ENST00000583100 276 ntBASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 AC020914.3-201ENST00000594712 304 ntBASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 AC244452.3-201ENST00000636814 210 ntBASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TTC39BQ5VTQ0 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 KHSRPP1-201ENST00000427983 1768 ntBASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms