Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 BEND3P3-201ENST00000611030 2440 ntBASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 AC092053.3-201ENST00000641308 4975 ntBASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 AL445209.1-201ENST00000607269 3491 ntBASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 SOCS2P1-201ENST00000417727 557 ntBASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 AL442647.2-201ENST00000429864 857 ntBASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 AC004967.1-201ENST00000453589 447 ntBASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 LSM12-202ENST00000585388 942 ntTSL 3 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 BAP1-211ENST00000615113 489 ntBASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 AC022144.1-201ENST00000602255 1580 ntBASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 AC020910.5-201ENST00000623668 1865 ntBASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 AGAP12P-201ENST00000585227 2359 ntBASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
LINC00242Q5T6M2 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 AL928654.5-201ENST00000624831 2501 ntBASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 MARK2P9-201ENST00000430958 1727 ntBASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms