Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TSR1Q2NL82 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TSR1Q2NL82 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TSR1Q2NL82 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TSR1Q2NL82 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.05■□□□□ 0.16
TSR1Q2NL82 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
TSR1Q2NL82 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC16.04■□□□□ 0.16
TSR1Q2NL82 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TSR1Q2NL82 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TSR1Q2NL82 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.04■□□□□ 0.16
TSR1Q2NL82 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
TSR1Q2NL82 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TSR1Q2NL82 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TSR1Q2NL82 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.04■□□□□ 0.16
TSR1Q2NL82 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TSR1Q2NL82 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TSR1Q2NL82 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TSR1Q2NL82 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TSR1Q2NL82 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.04■□□□□ 0.16
TSR1Q2NL82 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.04■□□□□ 0.16
TSR1Q2NL82 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TSR1Q2NL82 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC16.04■□□□□ 0.16
TSR1Q2NL82 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC16.04■□□□□ 0.16
TSR1Q2NL82 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.04■□□□□ 0.16
TSR1Q2NL82 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TSR1Q2NL82 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TSR1Q2NL82 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TSR1Q2NL82 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TSR1Q2NL82 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TSR1Q2NL82 AC015818.8-201ENST00000587907 1519 ntBASIC16.04■□□□□ 0.16
TSR1Q2NL82 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TSR1Q2NL82 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.03■□□□□ 0.16
TSR1Q2NL82 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TSR1Q2NL82 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.03■□□□□ 0.16
TSR1Q2NL82 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TSR1Q2NL82 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.03■□□□□ 0.16
TSR1Q2NL82 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TSR1Q2NL82 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TSR1Q2NL82 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TSR1Q2NL82 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TSR1Q2NL82 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TSR1Q2NL82 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.03■□□□□ 0.16
TSR1Q2NL82 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TSR1Q2NL82 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TSR1Q2NL82 SPDYE19P-201ENST00000338590 713 ntBASIC16.03■□□□□ 0.16
TSR1Q2NL82 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TSR1Q2NL82 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.03■□□□□ 0.16
TSR1Q2NL82 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.03■□□□□ 0.16
TSR1Q2NL82 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.03■□□□□ 0.16
TSR1Q2NL82 SOCS2P1-201ENST00000417727 557 ntBASIC16.03■□□□□ 0.16
TSR1Q2NL82 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TSR1Q2NL82 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.03■□□□□ 0.16
TSR1Q2NL82 FAM207CP-201ENST00000443486 507 ntBASIC16.03■□□□□ 0.16
TSR1Q2NL82 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TSR1Q2NL82 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TSR1Q2NL82 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TSR1Q2NL82 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.03■□□□□ 0.16
TSR1Q2NL82 AC131206.1-201ENST00000538078 1211 ntBASIC16.03■□□□□ 0.16
TSR1Q2NL82 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TSR1Q2NL82 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.03■□□□□ 0.16
TSR1Q2NL82 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC16.03■□□□□ 0.16
TSR1Q2NL82 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.03■□□□□ 0.16
TSR1Q2NL82 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TSR1Q2NL82 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.03■□□□□ 0.16
TSR1Q2NL82 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TSR1Q2NL82 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TSR1Q2NL82 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TSR1Q2NL82 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TSR1Q2NL82 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TSR1Q2NL82 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TSR1Q2NL82 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TSR1Q2NL82 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.03■□□□□ 0.16
TSR1Q2NL82 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TSR1Q2NL82 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.03■□□□□ 0.16
TSR1Q2NL82 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TSR1Q2NL82 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC16.03■□□□□ 0.16
TSR1Q2NL82 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TSR1Q2NL82 CETP-203ENST00000566128 1733 ntTSL 5 BASIC16.02■□□□□ 0.16
TSR1Q2NL82 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TSR1Q2NL82 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TSR1Q2NL82 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC16.02■□□□□ 0.16
TSR1Q2NL82 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TSR1Q2NL82 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TSR1Q2NL82 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TSR1Q2NL82 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TSR1Q2NL82 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TSR1Q2NL82 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TSR1Q2NL82 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TSR1Q2NL82 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.02■□□□□ 0.16
TSR1Q2NL82 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC16.02■□□□□ 0.16
TSR1Q2NL82 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TSR1Q2NL82 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
TSR1Q2NL82 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC16.02■□□□□ 0.16
TSR1Q2NL82 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TSR1Q2NL82 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TSR1Q2NL82 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.02■□□□□ 0.16
TSR1Q2NL82 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TSR1Q2NL82 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.02■□□□□ 0.16
TSR1Q2NL82 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TSR1Q2NL82 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms