Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.32□□□□□ -0.12
CDKL1Q00532 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CDKL1Q00532 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKL1Q00532 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKL1Q00532 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDKL1Q00532 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKL1Q00532 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
CDKL1Q00532 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDKL1Q00532 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDKL1Q00532 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.31□□□□□ -0.12
CDKL1Q00532 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDKL1Q00532 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDKL1Q00532 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.31□□□□□ -0.12
CDKL1Q00532 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDKL1Q00532 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDKL1Q00532 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CDKL1Q00532 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
CDKL1Q00532 KRT8P24-201ENST00000560290 1559 ntBASIC14.31□□□□□ -0.12
CDKL1Q00532 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDKL1Q00532 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CDKL1Q00532 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
CDKL1Q00532 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDKL1Q00532 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.31□□□□□ -0.12
CDKL1Q00532 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CDKL1Q00532 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDKL1Q00532 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDKL1Q00532 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CDKL1Q00532 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDKL1Q00532 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDKL1Q00532 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDKL1Q00532 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDKL1Q00532 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDKL1Q00532 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDKL1Q00532 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDKL1Q00532 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.31□□□□□ -0.12
CDKL1Q00532 MIR1202-201ENST00000408529 83 ntBASIC14.31□□□□□ -0.12
CDKL1Q00532 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CDKL1Q00532 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.31□□□□□ -0.12
CDKL1Q00532 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDKL1Q00532 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDKL1Q00532 CNN2P10-201ENST00000443067 918 ntBASIC14.31□□□□□ -0.12
CDKL1Q00532 CICP12-201ENST00000455801 843 ntBASIC14.31□□□□□ -0.12
CDKL1Q00532 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.31□□□□□ -0.12
CDKL1Q00532 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.31□□□□□ -0.12
CDKL1Q00532 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.31□□□□□ -0.12
CDKL1Q00532 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDKL1Q00532 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.31□□□□□ -0.12
CDKL1Q00532 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.31□□□□□ -0.12
CDKL1Q00532 LINC02084-201ENST00000606069 1096 ntBASIC14.31□□□□□ -0.12
CDKL1Q00532 AC012645.4-201ENST00000610691 1061 ntBASIC14.31□□□□□ -0.12
CDKL1Q00532 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.31□□□□□ -0.12
CDKL1Q00532 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDKL1Q00532 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.31□□□□□ -0.12
CDKL1Q00532 AC027601.3-201ENST00000622907 509 ntBASIC14.31□□□□□ -0.12
CDKL1Q00532 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.31□□□□□ -0.12
CDKL1Q00532 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.31□□□□□ -0.12
CDKL1Q00532 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.31□□□□□ -0.12
CDKL1Q00532 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDKL1Q00532 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
CDKL1Q00532 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDKL1Q00532 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDKL1Q00532 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDKL1Q00532 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CDKL1Q00532 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CDKL1Q00532 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.31□□□□□ -0.12
CDKL1Q00532 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDKL1Q00532 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CDKL1Q00532 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDKL1Q00532 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CDKL1Q00532 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CDKL1Q00532 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.31□□□□□ -0.12
CDKL1Q00532 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.31□□□□□ -0.12
CDKL1Q00532 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDKL1Q00532 AC011498.7-201ENST00000624986 2027 ntBASIC14.31□□□□□ -0.12
CDKL1Q00532 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDKL1Q00532 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CDKL1Q00532 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.3□□□□□ -0.12
CDKL1Q00532 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKL1Q00532 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKL1Q00532 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKL1Q00532 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CDKL1Q00532 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKL1Q00532 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKL1Q00532 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CDKL1Q00532 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CDKL1Q00532 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKL1Q00532 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKL1Q00532 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKL1Q00532 AC020658.7-201ENST00000624274 2442 ntBASIC14.3□□□□□ -0.12
CDKL1Q00532 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKL1Q00532 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKL1Q00532 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.3□□□□□ -0.12
CDKL1Q00532 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKL1Q00532 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.3□□□□□ -0.12
CDKL1Q00532 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKL1Q00532 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.3□□□□□ -0.12
CDKL1Q00532 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.3□□□□□ -0.12
CDKL1Q00532 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.3□□□□□ -0.12
CDKL1Q00532 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.3□□□□□ -0.12
CDKL1Q00532 GAPDHP21-201ENST00000450301 1010 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms