Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDKN2DP55273 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDKN2DP55273 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDKN2DP55273 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDKN2DP55273 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CDKN2DP55273 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CDKN2DP55273 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDKN2DP55273 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDKN2DP55273 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.31□□□□□ -0.12
CDKN2DP55273 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDKN2DP55273 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2DP55273 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2DP55273 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2DP55273 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2DP55273 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2DP55273 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.3□□□□□ -0.12
CDKN2DP55273 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.3□□□□□ -0.12
CDKN2DP55273 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CDKN2DP55273 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2DP55273 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2DP55273 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2DP55273 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2DP55273 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2DP55273 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2DP55273 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2DP55273 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2DP55273 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2DP55273 AC099336.1-201ENST00000417053 1171 ntBASIC14.3□□□□□ -0.12
CDKN2DP55273 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CDKN2DP55273 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.3□□□□□ -0.12
CDKN2DP55273 AC104989.1-201ENST00000519711 778 ntBASIC14.3□□□□□ -0.12
CDKN2DP55273 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.3□□□□□ -0.12
CDKN2DP55273 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.3□□□□□ -0.12
CDKN2DP55273 RBM8B-201ENST00000555532 525 ntBASIC14.3□□□□□ -0.12
CDKN2DP55273 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.3□□□□□ -0.12
CDKN2DP55273 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2DP55273 BAP1-211ENST00000615113 489 ntBASIC14.3□□□□□ -0.12
CDKN2DP55273 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.3□□□□□ -0.12
CDKN2DP55273 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CDKN2DP55273 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.3□□□□□ -0.12
CDKN2DP55273 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2DP55273 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2DP55273 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.3□□□□□ -0.12
CDKN2DP55273 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2DP55273 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2DP55273 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2DP55273 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2DP55273 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2DP55273 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.3□□□□□ -0.12
CDKN2DP55273 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2DP55273 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.3□□□□□ -0.12
CDKN2DP55273 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2DP55273 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.3□□□□□ -0.12
CDKN2DP55273 SBF1P1-201ENST00000444527 5631 ntBASIC14.3□□□□□ -0.12
CDKN2DP55273 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.3□□□□□ -0.12
CDKN2DP55273 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2DP55273 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2DP55273 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2DP55273 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2DP55273 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDKN2DP55273 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.29□□□□□ -0.12
CDKN2DP55273 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2DP55273 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2DP55273 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.29□□□□□ -0.12
CDKN2DP55273 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2DP55273 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2DP55273 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.29□□□□□ -0.12
CDKN2DP55273 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2DP55273 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.29□□□□□ -0.12
CDKN2DP55273 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.29□□□□□ -0.12
CDKN2DP55273 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
CDKN2DP55273 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.29□□□□□ -0.12
CDKN2DP55273 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2DP55273 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2DP55273 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2DP55273 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2DP55273 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDKN2DP55273 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDKN2DP55273 AL928654.5-201ENST00000624831 2501 ntBASIC14.29□□□□□ -0.12
CDKN2DP55273 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.29□□□□□ -0.12
CDKN2DP55273 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.29□□□□□ -0.12
CDKN2DP55273 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2DP55273 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.29□□□□□ -0.12
CDKN2DP55273 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.29□□□□□ -0.12
CDKN2DP55273 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.29□□□□□ -0.12
CDKN2DP55273 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2DP55273 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.29□□□□□ -0.12
CDKN2DP55273 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.29□□□□□ -0.12
CDKN2DP55273 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.29□□□□□ -0.12
CDKN2DP55273 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.29□□□□□ -0.12
CDKN2DP55273 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CDKN2DP55273 AL162426.1-201ENST00000624141 743 ntBASIC14.29□□□□□ -0.12
CDKN2DP55273 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2DP55273 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2DP55273 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.29□□□□□ -0.12
CDKN2DP55273 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2DP55273 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2DP55273 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDKN2DP55273 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CDKN2DP55273 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms