Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLK1P49759 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLK1P49759 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLK1P49759 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
CLK1P49759 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLK1P49759 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
CLK1P49759 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.75□□□□□ -0.21
CLK1P49759 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.75□□□□□ -0.21
CLK1P49759 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLK1P49759 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLK1P49759 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CLK1P49759 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLK1P49759 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLK1P49759 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.75□□□□□ -0.21
CLK1P49759 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLK1P49759 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
CLK1P49759 KRT8P14-201ENST00000414254 1442 ntBASIC13.75□□□□□ -0.21
CLK1P49759 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
CLK1P49759 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLK1P49759 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.75□□□□□ -0.21
CLK1P49759 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLK1P49759 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLK1P49759 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLK1P49759 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLK1P49759 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLK1P49759 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLK1P49759 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLK1P49759 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLK1P49759 ACTG1P3-201ENST00000431775 1114 ntBASIC13.75□□□□□ -0.21
CLK1P49759 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.75□□□□□ -0.21
CLK1P49759 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.75□□□□□ -0.21
CLK1P49759 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.75□□□□□ -0.21
CLK1P49759 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
CLK1P49759 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.75□□□□□ -0.21
CLK1P49759 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.75□□□□□ -0.21
CLK1P49759 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLK1P49759 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.75□□□□□ -0.21
CLK1P49759 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.75□□□□□ -0.21
CLK1P49759 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.75□□□□□ -0.21
CLK1P49759 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.75□□□□□ -0.21
CLK1P49759 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
CLK1P49759 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLK1P49759 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLK1P49759 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLK1P49759 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
CLK1P49759 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CLK1P49759 AC015909.5-201ENST00000624336 2266 ntBASIC13.75□□□□□ -0.21
CLK1P49759 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CLK1P49759 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.75□□□□□ -0.21
CLK1P49759 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLK1P49759 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLK1P49759 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLK1P49759 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.75□□□□□ -0.21
CLK1P49759 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.75□□□□□ -0.21
CLK1P49759 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLK1P49759 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLK1P49759 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.75□□□□□ -0.21
CLK1P49759 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLK1P49759 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLK1P49759 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLK1P49759 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.74□□□□□ -0.21
CLK1P49759 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
CLK1P49759 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLK1P49759 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLK1P49759 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLK1P49759 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CLK1P49759 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLK1P49759 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.74□□□□□ -0.21
CLK1P49759 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.74□□□□□ -0.21
CLK1P49759 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLK1P49759 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLK1P49759 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLK1P49759 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLK1P49759 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLK1P49759 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.74□□□□□ -0.21
CLK1P49759 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
CLK1P49759 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.74□□□□□ -0.21
CLK1P49759 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLK1P49759 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLK1P49759 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLK1P49759 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.74□□□□□ -0.21
CLK1P49759 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CLK1P49759 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CLK1P49759 AC022616.1-201ENST00000518688 554 ntBASIC13.74□□□□□ -0.21
CLK1P49759 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLK1P49759 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.74□□□□□ -0.21
CLK1P49759 MIR497HG-202ENST00000572453 3838 ntBASIC13.74□□□□□ -0.21
CLK1P49759 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.74□□□□□ -0.21
CLK1P49759 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.74□□□□□ -0.21
CLK1P49759 AC005252.2-201ENST00000624630 1141 ntBASIC13.74□□□□□ -0.21
CLK1P49759 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLK1P49759 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLK1P49759 USO1-201ENST00000264904 4135 ntTSL 2 BASIC13.74□□□□□ -0.21
CLK1P49759 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLK1P49759 USP47-202ENST00000339865 7775 ntTSL 2 BASIC13.74□□□□□ -0.21
CLK1P49759 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.74□□□□□ -0.21
CLK1P49759 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.74□□□□□ -0.21
CLK1P49759 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.74□□□□□ -0.21
CLK1P49759 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CLK1P49759 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms