Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A1P43005 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.18■□□□□ 0.02
SLC1A1P43005 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.18■□□□□ 0.02
SLC1A1P43005 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
SLC1A1P43005 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC1A1P43005 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.18■□□□□ 0.02
SLC1A1P43005 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SLC1A1P43005 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A1P43005 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.18■□□□□ 0.02
SLC1A1P43005 DUX4L46-201ENST00000566845 751 ntBASIC15.18■□□□□ 0.02
SLC1A1P43005 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.18■□□□□ 0.02
SLC1A1P43005 AC132192.2-201ENST00000596206 1147 ntBASIC15.18■□□□□ 0.02
SLC1A1P43005 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.18■□□□□ 0.02
SLC1A1P43005 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SLC1A1P43005 RHOXF1P1-202ENST00000635473 501 ntBASIC15.18■□□□□ 0.02
SLC1A1P43005 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SLC1A1P43005 AC072061.1-201ENST00000569710 2234 ntBASIC15.18■□□□□ 0.02
SLC1A1P43005 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
SLC1A1P43005 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SLC1A1P43005 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC1A1P43005 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SLC1A1P43005 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SLC1A1P43005 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
SLC1A1P43005 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A1P43005 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC1A1P43005 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SLC1A1P43005 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC1A1P43005 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A1P43005 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A1P43005 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SLC1A1P43005 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SLC1A1P43005 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC1A1P43005 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A1P43005 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC1A1P43005 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC1A1P43005 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A1P43005 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A1P43005 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC1A1P43005 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A1P43005 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC1A1P43005 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC1A1P43005 AL157407.1-201ENST00000435784 904 ntBASIC15.17■□□□□ 0.02
SLC1A1P43005 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A1P43005 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.17■□□□□ 0.02
SLC1A1P43005 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A1P43005 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC1A1P43005 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC1A1P43005 AP000812.2-201ENST00000538934 718 ntBASIC15.17■□□□□ 0.02
SLC1A1P43005 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A1P43005 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A1P43005 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC1A1P43005 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SLC1A1P43005 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A1P43005 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A1P43005 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A1P43005 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A1P43005 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A1P43005 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A1P43005 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A1P43005 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A1P43005 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A1P43005 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A1P43005 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC1A1P43005 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A1P43005 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A1P43005 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A1P43005 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A1P43005 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A1P43005 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A1P43005 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A1P43005 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SLC1A1P43005 LAP3P2-201ENST00000454686 1454 ntBASIC15.16■□□□□ 0.02
SLC1A1P43005 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A1P43005 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
SLC1A1P43005 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A1P43005 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SLC1A1P43005 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A1P43005 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A1P43005 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A1P43005 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A1P43005 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A1P43005 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.16■□□□□ 0.02
SLC1A1P43005 AL645933.1-201ENST00000440087 609 ntBASIC15.16■□□□□ 0.02
SLC1A1P43005 ST13P19-201ENST00000442505 1124 ntBASIC15.16■□□□□ 0.02
SLC1A1P43005 CNN2P10-201ENST00000443067 918 ntBASIC15.16■□□□□ 0.02
SLC1A1P43005 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC1A1P43005 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC1A1P43005 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC1A1P43005 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.16■□□□□ 0.02
SLC1A1P43005 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.16■□□□□ 0.02
SLC1A1P43005 AC021016.3-201ENST00000608367 477 ntBASIC15.16■□□□□ 0.02
SLC1A1P43005 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC1A1P43005 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A1P43005 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC1A1P43005 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC1A1P43005 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC1A1P43005 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC1A1P43005 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC1A1P43005 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SLC1A1P43005 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms