Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF1P30408 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF1P30408 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
TM4SF1P30408 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
TM4SF1P30408 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF1P30408 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF1P30408 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF1P30408 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF1P30408 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.58■□□□□ 0.4
TM4SF1P30408 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
TM4SF1P30408 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.57■□□□□ 0.4
TM4SF1P30408 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TM4SF1P30408 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF1P30408 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF1P30408 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TM4SF1P30408 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.57■□□□□ 0.4
TM4SF1P30408 DUT-208ENST00000559540 1441 ntTSL 2 BASIC17.57■□□□□ 0.4
TM4SF1P30408 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF1P30408 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF1P30408 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TM4SF1P30408 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.57■□□□□ 0.4
TM4SF1P30408 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.57■□□□□ 0.4
TM4SF1P30408 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.57■□□□□ 0.4
TM4SF1P30408 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.57■□□□□ 0.4
TM4SF1P30408 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC17.57■□□□□ 0.4
TM4SF1P30408 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF1P30408 CTSL-202ENST00000342020 933 ntTSL 2 BASIC17.57■□□□□ 0.4
TM4SF1P30408 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC17.57■□□□□ 0.4
TM4SF1P30408 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TM4SF1P30408 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF1P30408 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF1P30408 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC17.57■□□□□ 0.4
TM4SF1P30408 HNRNPA1P21-201ENST00000424115 961 ntBASIC17.57■□□□□ 0.4
TM4SF1P30408 AC027612.2-202ENST00000445955 1199 ntBASIC17.57■□□□□ 0.4
TM4SF1P30408 AC113347.2-201ENST00000512350 279 ntBASIC17.57■□□□□ 0.4
TM4SF1P30408 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC17.57■□□□□ 0.4
TM4SF1P30408 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC17.57■□□□□ 0.4
TM4SF1P30408 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TM4SF1P30408 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF1P30408 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF1P30408 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
TM4SF1P30408 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
TM4SF1P30408 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF1P30408 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF1P30408 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF1P30408 AC008536.3-201ENST00000623282 1599 ntBASIC17.57■□□□□ 0.4
TM4SF1P30408 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF1P30408 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF1P30408 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TM4SF1P30408 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF1P30408 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF1P30408 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TM4SF1P30408 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF1P30408 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.56■□□□□ 0.4
TM4SF1P30408 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF1P30408 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.56■□□□□ 0.4
TM4SF1P30408 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF1P30408 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF1P30408 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TM4SF1P30408 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF1P30408 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.56■□□□□ 0.4
TM4SF1P30408 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF1P30408 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF1P30408 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF1P30408 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.56■□□□□ 0.4
TM4SF1P30408 AC011498.7-201ENST00000624986 2027 ntBASIC17.56■□□□□ 0.4
TM4SF1P30408 SIRPB3P-201ENST00000340424 1216 ntBASIC17.56■□□□□ 0.4
TM4SF1P30408 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF1P30408 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC17.56■□□□□ 0.4
TM4SF1P30408 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF1P30408 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC17.56■□□□□ 0.4
TM4SF1P30408 ACTBP14-201ENST00000411655 1089 ntBASIC17.56■□□□□ 0.4
TM4SF1P30408 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC17.56■□□□□ 0.4
TM4SF1P30408 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TM4SF1P30408 EEF1DP2-201ENST00000433698 843 ntBASIC17.56■□□□□ 0.4
TM4SF1P30408 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TM4SF1P30408 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC17.56■□□□□ 0.4
TM4SF1P30408 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC17.56■□□□□ 0.4
TM4SF1P30408 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC17.56■□□□□ 0.4
TM4SF1P30408 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC17.56■□□□□ 0.4
TM4SF1P30408 MED11-202ENST00000573708 802 ntTSL 2 BASIC17.56■□□□□ 0.4
TM4SF1P30408 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC17.56■□□□□ 0.4
TM4SF1P30408 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
TM4SF1P30408 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC17.56■□□□□ 0.4
TM4SF1P30408 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
TM4SF1P30408 GGNBP1-204ENST00000613113 887 ntBASIC17.56■□□□□ 0.4
TM4SF1P30408 AC011462.4-201ENST00000616866 449 ntBASIC17.56■□□□□ 0.4
TM4SF1P30408 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF1P30408 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.56■□□□□ 0.4
TM4SF1P30408 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC17.56■□□□□ 0.4
TM4SF1P30408 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF1P30408 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF1P30408 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TM4SF1P30408 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.56■□□□□ 0.4
TM4SF1P30408 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF1P30408 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF1P30408 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TM4SF1P30408 CICP14-201ENST00000629111 2732 ntBASIC17.56■□□□□ 0.4
TM4SF1P30408 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF1P30408 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms