Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.36□□□□□ -0.27
SHC1P29353 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SHC1P29353 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.36□□□□□ -0.27
SHC1P29353 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.36□□□□□ -0.27
SHC1P29353 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SHC1P29353 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SHC1P29353 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHC1P29353 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.36□□□□□ -0.27
SHC1P29353 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.36□□□□□ -0.27
SHC1P29353 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHC1P29353 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHC1P29353 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHC1P29353 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SHC1P29353 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SHC1P29353 AC130686.1-201ENST00000622936 2466 ntBASIC13.36□□□□□ -0.27
SHC1P29353 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHC1P29353 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHC1P29353 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHC1P29353 MRPL37P1-201ENST00000592451 1337 ntBASIC13.36□□□□□ -0.27
SHC1P29353 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SHC1P29353 AL359183.1-201ENST00000623796 2132 ntBASIC13.36□□□□□ -0.27
SHC1P29353 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHC1P29353 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.36□□□□□ -0.27
SHC1P29353 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHC1P29353 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHC1P29353 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHC1P29353 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHC1P29353 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.35□□□□□ -0.27
SHC1P29353 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHC1P29353 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHC1P29353 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SHC1P29353 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHC1P29353 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHC1P29353 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.35□□□□□ -0.27
SHC1P29353 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHC1P29353 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SHC1P29353 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SHC1P29353 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.35□□□□□ -0.27
SHC1P29353 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
SHC1P29353 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHC1P29353 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHC1P29353 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.35□□□□□ -0.27
SHC1P29353 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.35□□□□□ -0.27
SHC1P29353 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHC1P29353 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHC1P29353 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.35□□□□□ -0.27
SHC1P29353 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.35□□□□□ -0.27
SHC1P29353 AC007274.1-201ENST00000439805 662 ntBASIC13.35□□□□□ -0.27
SHC1P29353 AC100850.1-201ENST00000506768 649 ntBASIC13.35□□□□□ -0.27
SHC1P29353 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.35□□□□□ -0.27
SHC1P29353 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.35□□□□□ -0.27
SHC1P29353 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.35□□□□□ -0.27
SHC1P29353 AL136301.1-201ENST00000615830 422 ntBASIC13.35□□□□□ -0.27
SHC1P29353 AP001002.3-201ENST00000623482 206 ntBASIC13.35□□□□□ -0.27
SHC1P29353 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.35□□□□□ -0.27
SHC1P29353 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SHC1P29353 DGCR9-201ENST00000609630 2415 ntBASIC13.35□□□□□ -0.27
SHC1P29353 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHC1P29353 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.35□□□□□ -0.27
SHC1P29353 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SHC1P29353 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.35□□□□□ -0.27
SHC1P29353 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHC1P29353 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHC1P29353 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SHC1P29353 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.35□□□□□ -0.27
SHC1P29353 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHC1P29353 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHC1P29353 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SHC1P29353 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
SHC1P29353 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHC1P29353 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHC1P29353 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHC1P29353 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.34□□□□□ -0.27
SHC1P29353 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHC1P29353 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHC1P29353 AC016397.2-201ENST00000624848 1985 ntBASIC13.34□□□□□ -0.27
SHC1P29353 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SHC1P29353 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHC1P29353 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SHC1P29353 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SHC1P29353 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.34□□□□□ -0.27
SHC1P29353 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHC1P29353 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.34□□□□□ -0.27
SHC1P29353 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
SHC1P29353 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SHC1P29353 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.34□□□□□ -0.27
SHC1P29353 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHC1P29353 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHC1P29353 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SHC1P29353 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SHC1P29353 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHC1P29353 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHC1P29353 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHC1P29353 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHC1P29353 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHC1P29353 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SHC1P29353 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SHC1P29353 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.34□□□□□ -0.27
SHC1P29353 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SHC1P29353 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms