Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC18.36■□□□□ 0.53
RXRBP28702 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RXRBP28702 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC18.36■□□□□ 0.53
RXRBP28702 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC18.36■□□□□ 0.53
RXRBP28702 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.36■□□□□ 0.53
RXRBP28702 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.36■□□□□ 0.53
RXRBP28702 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
RXRBP28702 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RXRBP28702 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RXRBP28702 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC18.36■□□□□ 0.53
RXRBP28702 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC18.36■□□□□ 0.53
RXRBP28702 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RXRBP28702 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RXRBP28702 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RXRBP28702 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RXRBP28702 PCDHA12-202ENST00000613593 2588 ntBASIC18.36■□□□□ 0.53
RXRBP28702 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RXRBP28702 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RXRBP28702 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RXRBP28702 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.35■□□□□ 0.53
RXRBP28702 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC18.35■□□□□ 0.53
RXRBP28702 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC18.35■□□□□ 0.53
RXRBP28702 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.35■□□□□ 0.53
RXRBP28702 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RXRBP28702 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RXRBP28702 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RXRBP28702 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RXRBP28702 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RXRBP28702 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RXRBP28702 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
RXRBP28702 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC18.35■□□□□ 0.53
RXRBP28702 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RXRBP28702 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RXRBP28702 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RXRBP28702 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RXRBP28702 VSTM1-205ENST00000425006 608 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RXRBP28702 AC010894.2-201ENST00000444196 561 ntTSL 3 BASIC18.35■□□□□ 0.53
RXRBP28702 EEF1GP1-201ENST00000457231 1299 ntBASIC18.35■□□□□ 0.53
RXRBP28702 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RXRBP28702 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC18.35■□□□□ 0.53
RXRBP28702 RN7SL638P-201ENST00000494527 290 ntBASIC18.35■□□□□ 0.53
RXRBP28702 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC18.35■□□□□ 0.53
RXRBP28702 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC18.35■□□□□ 0.53
RXRBP28702 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC18.35■□□□□ 0.53
RXRBP28702 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RXRBP28702 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC18.35■□□□□ 0.53
RXRBP28702 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC18.35■□□□□ 0.53
RXRBP28702 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC18.35■□□□□ 0.53
RXRBP28702 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RXRBP28702 AL158032.2-201ENST00000616818 195 ntBASIC18.35■□□□□ 0.53
RXRBP28702 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RXRBP28702 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RXRBP28702 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.35■□□□□ 0.53
RXRBP28702 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RXRBP28702 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RXRBP28702 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RXRBP28702 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RXRBP28702 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RXRBP28702 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.35■□□□□ 0.53
RXRBP28702 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RXRBP28702 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RXRBP28702 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.34■□□□□ 0.53
RXRBP28702 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
RXRBP28702 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RXRBP28702 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RXRBP28702 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RXRBP28702 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RXRBP28702 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
RXRBP28702 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RXRBP28702 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RXRBP28702 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RXRBP28702 AL391903.1-201ENST00000407513 365 ntBASIC18.34■□□□□ 0.53
RXRBP28702 MIR1307-201ENST00000408840 149 ntBASIC18.34■□□□□ 0.53
RXRBP28702 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC18.34■□□□□ 0.53
RXRBP28702 PTPA-219ENST00000435305 530 ntTSL 2 BASIC18.34■□□□□ 0.53
RXRBP28702 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC18.34■□□□□ 0.53
RXRBP28702 RN7SL477P-201ENST00000488440 286 ntBASIC18.34■□□□□ 0.53
RXRBP28702 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC18.34■□□□□ 0.53
RXRBP28702 AC098591.1-202ENST00000507914 937 ntBASIC18.34■□□□□ 0.53
RXRBP28702 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC18.34■□□□□ 0.53
RXRBP28702 AC032044.1-201ENST00000570924 570 ntTSL 4 BASIC18.34■□□□□ 0.53
RXRBP28702 AC008622.3-201ENST00000621170 600 ntBASIC18.34■□□□□ 0.53
RXRBP28702 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RXRBP28702 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RXRBP28702 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC18.34■□□□□ 0.53
RXRBP28702 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RXRBP28702 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RXRBP28702 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RXRBP28702 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RXRBP28702 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.34■□□□□ 0.53
RXRBP28702 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RXRBP28702 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RXRBP28702 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RXRBP28702 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
RXRBP28702 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC18.33■□□□□ 0.53
RXRBP28702 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RXRBP28702 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RXRBP28702 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.33■□□□□ 0.53
RXRBP28702 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RXRBP28702 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms