Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.48□□□□□ -0.41
TNFSF4P23510 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.48□□□□□ -0.41
TNFSF4P23510 AC009955.4-201ENST00000597192 544 ntBASIC12.48□□□□□ -0.41
TNFSF4P23510 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.48□□□□□ -0.41
TNFSF4P23510 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
TNFSF4P23510 AC005695.3-201ENST00000614522 232 ntBASIC12.48□□□□□ -0.41
TNFSF4P23510 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.48□□□□□ -0.41
TNFSF4P23510 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.48□□□□□ -0.41
TNFSF4P23510 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 AGGF1P1-201ENST00000509500 2073 ntBASIC12.48□□□□□ -0.41
TNFSF4P23510 AC079781.5-202ENST00000641784 3743 ntBASIC12.48□□□□□ -0.41
TNFSF4P23510 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.48□□□□□ -0.41
TNFSF4P23510 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.48□□□□□ -0.41
TNFSF4P23510 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
TNFSF4P23510 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
TNFSF4P23510 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.48□□□□□ -0.41
TNFSF4P23510 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
TNFSF4P23510 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 PTPRVP-205ENST00000641549 5067 ntBASIC12.48□□□□□ -0.41
TNFSF4P23510 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TNFSF4P23510 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.48□□□□□ -0.41
TNFSF4P23510 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.48□□□□□ -0.41
TNFSF4P23510 AL590440.2-201ENST00000641973 1595 ntBASIC12.47□□□□□ -0.41
TNFSF4P23510 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
TNFSF4P23510 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TNFSF4P23510 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TNFSF4P23510 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.47□□□□□ -0.41
TNFSF4P23510 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.47□□□□□ -0.41
TNFSF4P23510 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.47□□□□□ -0.41
TNFSF4P23510 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TNFSF4P23510 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TNFSF4P23510 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
TNFSF4P23510 AL008718.2-201ENST00000609206 1313 ntBASIC12.47□□□□□ -0.41
TNFSF4P23510 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.47□□□□□ -0.41
TNFSF4P23510 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.47□□□□□ -0.41
TNFSF4P23510 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
TNFSF4P23510 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TNFSF4P23510 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TNFSF4P23510 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TNFSF4P23510 FAM86MP-201ENST00000340703 885 ntBASIC12.47□□□□□ -0.41
TNFSF4P23510 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
TNFSF4P23510 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TNFSF4P23510 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.47□□□□□ -0.41
TNFSF4P23510 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC12.47□□□□□ -0.41
TNFSF4P23510 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.47□□□□□ -0.41
TNFSF4P23510 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.47□□□□□ -0.41
TNFSF4P23510 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.47□□□□□ -0.41
TNFSF4P23510 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
TNFSF4P23510 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC12.47□□□□□ -0.41
TNFSF4P23510 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.47□□□□□ -0.41
TNFSF4P23510 AC126915.1-201ENST00000522847 1038 ntBASIC12.47□□□□□ -0.41
TNFSF4P23510 AC027237.1-201ENST00000560942 655 ntBASIC12.47□□□□□ -0.41
TNFSF4P23510 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
TNFSF4P23510 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC12.47□□□□□ -0.41
TNFSF4P23510 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
TNFSF4P23510 AC243960.2-201ENST00000600996 747 ntBASIC12.47□□□□□ -0.41
TNFSF4P23510 MIR6074-201ENST00000612054 107 ntBASIC12.47□□□□□ -0.41
TNFSF4P23510 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.47□□□□□ -0.41
TNFSF4P23510 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
TNFSF4P23510 AL162426.1-201ENST00000624141 743 ntBASIC12.47□□□□□ -0.41
TNFSF4P23510 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.47□□□□□ -0.41
TNFSF4P23510 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.47□□□□□ -0.41
TNFSF4P23510 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
TNFSF4P23510 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TNFSF4P23510 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TNFSF4P23510 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TNFSF4P23510 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.47□□□□□ -0.41
TNFSF4P23510 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.47□□□□□ -0.41
TNFSF4P23510 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.47□□□□□ -0.41
TNFSF4P23510 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.47□□□□□ -0.41
TNFSF4P23510 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TNFSF4P23510 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TNFSF4P23510 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TNFSF4P23510 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TNFSF4P23510 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
TNFSF4P23510 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.47□□□□□ -0.41
TNFSF4P23510 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TNFSF4P23510 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TNFSF4P23510 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
TNFSF4P23510 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.47□□□□□ -0.41
TNFSF4P23510 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TNFSF4P23510 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TNFSF4P23510 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.47□□□□□ -0.41
TNFSF4P23510 AC113367.3-201ENST00000508316 1912 ntBASIC12.47□□□□□ -0.41
TNFSF4P23510 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
TNFSF4P23510 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TNFSF4P23510 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.46□□□□□ -0.41
TNFSF4P23510 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.46□□□□□ -0.41
TNFSF4P23510 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms