Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NR4A1P22736 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
NR4A1P22736 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.59□□□□□ -0.23
NR4A1P22736 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.59□□□□□ -0.23
NR4A1P22736 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.59□□□□□ -0.23
NR4A1P22736 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.59□□□□□ -0.23
NR4A1P22736 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.59□□□□□ -0.23
NR4A1P22736 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.59□□□□□ -0.23
NR4A1P22736 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.59□□□□□ -0.23
NR4A1P22736 AC055876.2-201ENST00000531834 546 ntBASIC13.59□□□□□ -0.23
NR4A1P22736 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.59□□□□□ -0.23
NR4A1P22736 AC023310.3-201ENST00000557027 670 ntBASIC13.59□□□□□ -0.23
NR4A1P22736 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NR4A1P22736 AC100756.1-201ENST00000562736 682 ntBASIC13.59□□□□□ -0.23
NR4A1P22736 RARRES2P5-201ENST00000564013 466 ntBASIC13.59□□□□□ -0.23
NR4A1P22736 AC138749.3-201ENST00000567691 622 ntBASIC13.59□□□□□ -0.23
NR4A1P22736 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.59□□□□□ -0.23
NR4A1P22736 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.59□□□□□ -0.23
NR4A1P22736 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.59□□□□□ -0.23
NR4A1P22736 AC099568.2-201ENST00000609194 695 ntBASIC13.59□□□□□ -0.23
NR4A1P22736 AC116165.1-201ENST00000611806 668 ntBASIC13.59□□□□□ -0.23
NR4A1P22736 AL662799.1-202ENST00000614205 422 ntBASIC13.59□□□□□ -0.23
NR4A1P22736 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NR4A1P22736 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NR4A1P22736 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NR4A1P22736 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NR4A1P22736 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NR4A1P22736 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
NR4A1P22736 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NR4A1P22736 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.59□□□□□ -0.23
NR4A1P22736 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NR4A1P22736 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
NR4A1P22736 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
NR4A1P22736 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.59□□□□□ -0.23
NR4A1P22736 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NR4A1P22736 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
NR4A1P22736 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
NR4A1P22736 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.59□□□□□ -0.23
NR4A1P22736 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NR4A1P22736 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
NR4A1P22736 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.58□□□□□ -0.23
NR4A1P22736 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC13.58□□□□□ -0.23
NR4A1P22736 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.58□□□□□ -0.24
NR4A1P22736 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
NR4A1P22736 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.58□□□□□ -0.24
NR4A1P22736 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC13.58□□□□□ -0.24
NR4A1P22736 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.58□□□□□ -0.24
NR4A1P22736 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A1P22736 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC13.58□□□□□ -0.24
NR4A1P22736 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A1P22736 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.58□□□□□ -0.24
NR4A1P22736 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A1P22736 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A1P22736 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.58□□□□□ -0.24
NR4A1P22736 KRT18P64-201ENST00000434946 1219 ntBASIC13.58□□□□□ -0.24
NR4A1P22736 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.58□□□□□ -0.24
NR4A1P22736 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.58□□□□□ -0.24
NR4A1P22736 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A1P22736 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.58□□□□□ -0.24
NR4A1P22736 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
NR4A1P22736 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.58□□□□□ -0.24
NR4A1P22736 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.58□□□□□ -0.24
NR4A1P22736 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.58□□□□□ -0.24
NR4A1P22736 API5-211ENST00000534695 560 ntTSL 5 BASIC13.58□□□□□ -0.24
NR4A1P22736 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.58□□□□□ -0.24
NR4A1P22736 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.58□□□□□ -0.24
NR4A1P22736 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.58□□□□□ -0.24
NR4A1P22736 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.58□□□□□ -0.24
NR4A1P22736 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.58□□□□□ -0.24
NR4A1P22736 RRP7BP-205ENST00000566851 833 ntBASIC13.58□□□□□ -0.24
NR4A1P22736 SPDYE22P-201ENST00000582158 798 ntBASIC13.58□□□□□ -0.24
NR4A1P22736 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A1P22736 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A1P22736 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A1P22736 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A1P22736 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A1P22736 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A1P22736 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
NR4A1P22736 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
NR4A1P22736 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
NR4A1P22736 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
NR4A1P22736 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A1P22736 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A1P22736 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
NR4A1P22736 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
NR4A1P22736 AC131902.2-201ENST00000566892 2172 ntBASIC13.58□□□□□ -0.24
NR4A1P22736 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A1P22736 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A1P22736 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A1P22736 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A1P22736 PCDHA6-201ENST00000378126 3267 ntBASIC13.58□□□□□ -0.24
NR4A1P22736 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A1P22736 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NR4A1P22736 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NR4A1P22736 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.57□□□□□ -0.24
NR4A1P22736 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.57□□□□□ -0.24
NR4A1P22736 PCDHA5-203ENST00000614258 4248 ntBASIC13.57□□□□□ -0.24
NR4A1P22736 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
NR4A1P22736 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NR4A1P22736 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms