Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.83■□□□□ 0.12
RFX1P22670 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX1P22670 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX1P22670 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RFX1P22670 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
RFX1P22670 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RFX1P22670 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX1P22670 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX1P22670 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RFX1P22670 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX1P22670 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.83■□□□□ 0.12
RFX1P22670 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.83■□□□□ 0.12
RFX1P22670 AC012617.1-204ENST00000586340 2305 ntBASIC15.83■□□□□ 0.12
RFX1P22670 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RFX1P22670 KRT8P24-201ENST00000560290 1559 ntBASIC15.83■□□□□ 0.12
RFX1P22670 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX1P22670 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.83■□□□□ 0.12
RFX1P22670 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.83■□□□□ 0.12
RFX1P22670 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.83■□□□□ 0.12
RFX1P22670 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
RFX1P22670 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RFX1P22670 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.82■□□□□ 0.12
RFX1P22670 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.82■□□□□ 0.12
RFX1P22670 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFX1P22670 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFX1P22670 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFX1P22670 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFX1P22670 MST1P2-201ENST00000457982 2291 ntBASIC15.82■□□□□ 0.12
RFX1P22670 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFX1P22670 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFX1P22670 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFX1P22670 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.82■□□□□ 0.12
RFX1P22670 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.82■□□□□ 0.12
RFX1P22670 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RFX1P22670 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.82■□□□□ 0.12
RFX1P22670 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.82■□□□□ 0.12
RFX1P22670 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.82■□□□□ 0.12
RFX1P22670 MIR3619-201ENST00000579667 83 ntBASIC15.82■□□□□ 0.12
RFX1P22670 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC15.82■□□□□ 0.12
RFX1P22670 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFX1P22670 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC15.82■□□□□ 0.12
RFX1P22670 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFX1P22670 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.82■□□□□ 0.12
RFX1P22670 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFX1P22670 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
RFX1P22670 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFX1P22670 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFX1P22670 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFX1P22670 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.82■□□□□ 0.12
RFX1P22670 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFX1P22670 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.82■□□□□ 0.12
RFX1P22670 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFX1P22670 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFX1P22670 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
RFX1P22670 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.82■□□□□ 0.12
RFX1P22670 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFX1P22670 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFX1P22670 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFX1P22670 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.82■□□□□ 0.12
RFX1P22670 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.82■□□□□ 0.12
RFX1P22670 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFX1P22670 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFX1P22670 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RFX1P22670 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFX1P22670 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFX1P22670 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFX1P22670 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFX1P22670 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFX1P22670 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFX1P22670 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFX1P22670 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFX1P22670 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFX1P22670 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
RFX1P22670 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFX1P22670 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFX1P22670 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFX1P22670 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.81■□□□□ 0.12
RFX1P22670 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFX1P22670 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.81■□□□□ 0.12
RFX1P22670 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.81■□□□□ 0.12
RFX1P22670 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.81■□□□□ 0.12
RFX1P22670 CNN2P10-201ENST00000443067 918 ntBASIC15.81■□□□□ 0.12
RFX1P22670 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFX1P22670 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFX1P22670 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.81■□□□□ 0.12
RFX1P22670 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFX1P22670 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFX1P22670 FGFR3P5-201ENST00000564496 886 ntBASIC15.81■□□□□ 0.12
RFX1P22670 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.81■□□□□ 0.12
RFX1P22670 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.81■□□□□ 0.12
RFX1P22670 ZACNP1-201ENST00000612259 710 ntBASIC15.81■□□□□ 0.12
RFX1P22670 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.81■□□□□ 0.12
RFX1P22670 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFX1P22670 AC041040.2-201ENST00000622926 2899 ntBASIC15.81■□□□□ 0.12
RFX1P22670 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFX1P22670 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
RFX1P22670 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFX1P22670 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFX1P22670 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFX1P22670 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms