Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 CCAR2-206ENST00000520861 3560 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
RAB4AP20338 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 SH3RF2-206ENST00000511217 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC11.18□□□□□ -0.62
RAB4AP20338 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
RAB4AP20338 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 BSG-215ENST00000618006 1329 ntTSL 2 BASIC11.18□□□□□ -0.62
RAB4AP20338 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 RCAN1-214ENST00000620920 2257 ntTSL 4 BASIC11.18□□□□□ -0.62
RAB4AP20338 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
RAB4AP20338 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC11.18□□□□□ -0.62
RAB4AP20338 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC11.18□□□□□ -0.62
RAB4AP20338 FAM220BP-201ENST00000377689 816 ntBASIC11.18□□□□□ -0.62
RAB4AP20338 PP14571-201ENST00000404327 934 ntTSL 2 BASIC11.18□□□□□ -0.62
RAB4AP20338 AZGP1P1-201ENST00000411909 902 ntBASIC11.18□□□□□ -0.62
RAB4AP20338 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC11.18□□□□□ -0.62
RAB4AP20338 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
RAB4AP20338 PRELID1P1-202ENST00000567272 903 ntBASIC11.18□□□□□ -0.62
RAB4AP20338 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
RAB4AP20338 IFNL4P1-201ENST00000607083 540 ntBASIC11.18□□□□□ -0.62
RAB4AP20338 AC026979.3-201ENST00000607315 403 ntBASIC11.18□□□□□ -0.62
RAB4AP20338 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 AC007787.1-201ENST00000588095 1583 ntBASIC11.18□□□□□ -0.62
RAB4AP20338 ZC3H10-201ENST00000257940 7228 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC11.18□□□□□ -0.62
RAB4AP20338 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
RAB4AP20338 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC11.18□□□□□ -0.62
RAB4AP20338 VAV1-207ENST00000599806 2717 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 PXMP4-203ENST00000409299 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC11.18□□□□□ -0.62
RAB4AP20338 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
RAB4AP20338 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
RAB4AP20338 ZZEF1-201ENST00000381638 11456 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC11.18□□□□□ -0.62
RAB4AP20338 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC11.18□□□□□ -0.62
RAB4AP20338 PLAU-201ENST00000372764 2321 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RAB4AP20338 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
RAB4AP20338 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
RAB4AP20338 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC11.18□□□□□ -0.62
RAB4AP20338 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC11.18□□□□□ -0.62
RAB4AP20338 AC025580.3-201ENST00000617932 1424 ntBASIC11.18□□□□□ -0.62
RAB4AP20338 PCNX2-203ENST00000344698 5348 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
RAB4AP20338 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
RAB4AP20338 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RAB4AP20338 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
RAB4AP20338 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
RAB4AP20338 REXO1L4P-201ENST00000605109 1937 ntBASIC11.17□□□□□ -0.62
RAB4AP20338 SCN5A-202ENST00000333535 8456 ntAPPRIS P5 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB4AP20338 AL031432.4-201ENST00000641729 2190 ntBASIC11.17□□□□□ -0.62
RAB4AP20338 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB4AP20338 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB4AP20338 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC11.17□□□□□ -0.62
RAB4AP20338 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB4AP20338 LIMCH1-213ENST00000511496 3439 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RAB4AP20338 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB4AP20338 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
RAB4AP20338 AC017083.4-201ENST00000406334 2306 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
RAB4AP20338 PAM-203ENST00000346918 3302 ntTSL 5 BASIC11.17□□□□□ -0.62
RAB4AP20338 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RAB4AP20338 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB4AP20338 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC11.17□□□□□ -0.62
RAB4AP20338 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
RAB4AP20338 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB4AP20338 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
RAB4AP20338 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC11.17□□□□□ -0.62
RAB4AP20338 CRCP-205ENST00000431089 942 ntTSL 2 BASIC11.17□□□□□ -0.62
RAB4AP20338 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC11.17□□□□□ -0.62
RAB4AP20338 AF186996.4-201ENST00000467186 377 ntBASIC11.17□□□□□ -0.62
RAB4AP20338 SKP2-204ENST00000508514 821 ntTSL 3 BASIC11.17□□□□□ -0.62
RAB4AP20338 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC11.17□□□□□ -0.62
RAB4AP20338 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC11.17□□□□□ -0.62
RAB4AP20338 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB4AP20338 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC11.17□□□□□ -0.62
RAB4AP20338 PRR29-207ENST00000580752 458 ntTSL 3 BASIC11.17□□□□□ -0.62
RAB4AP20338 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB4AP20338 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC11.17□□□□□ -0.62
RAB4AP20338 NKG7-205ENST00000600427 520 ntTSL 3 BASIC11.17□□□□□ -0.62
RAB4AP20338 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC11.17□□□□□ -0.62
RAB4AP20338 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms