Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCNA2P20248 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CCNA2P20248 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.79□□□□□ -0.2
CCNA2P20248 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.79□□□□□ -0.2
CCNA2P20248 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCNA2P20248 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CCNA2P20248 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CCNA2P20248 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCNA2P20248 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCNA2P20248 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCNA2P20248 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCNA2P20248 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CCNA2P20248 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCNA2P20248 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCNA2P20248 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCNA2P20248 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCNA2P20248 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCNA2P20248 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCNA2P20248 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.78□□□□□ -0.2
CCNA2P20248 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.78□□□□□ -0.2
CCNA2P20248 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CCNA2P20248 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.78□□□□□ -0.2
CCNA2P20248 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.78□□□□□ -0.2
CCNA2P20248 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.78□□□□□ -0.2
CCNA2P20248 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
CCNA2P20248 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CCNA2P20248 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.78□□□□□ -0.2
CCNA2P20248 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
CCNA2P20248 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.78□□□□□ -0.2
CCNA2P20248 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.78□□□□□ -0.2
CCNA2P20248 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.78□□□□□ -0.2
CCNA2P20248 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CCNA2P20248 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.78□□□□□ -0.2
CCNA2P20248 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.78□□□□□ -0.2
CCNA2P20248 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.78□□□□□ -0.2
CCNA2P20248 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CCNA2P20248 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CCNA2P20248 LRRC59-203ENST00000576448 1531 ntBASIC13.78□□□□□ -0.2
CCNA2P20248 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.78□□□□□ -0.2
CCNA2P20248 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.78□□□□□ -0.2
CCNA2P20248 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.78□□□□□ -0.2
CCNA2P20248 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.78□□□□□ -0.2
CCNA2P20248 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.78□□□□□ -0.2
CCNA2P20248 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CCNA2P20248 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.78□□□□□ -0.2
CCNA2P20248 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNA2P20248 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.78□□□□□ -0.2
CCNA2P20248 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.2
CCNA2P20248 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
CCNA2P20248 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CCNA2P20248 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCNA2P20248 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCNA2P20248 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCNA2P20248 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.2
CCNA2P20248 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCNA2P20248 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCNA2P20248 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.77□□□□□ -0.21
CCNA2P20248 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
CCNA2P20248 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.77□□□□□ -0.21
CCNA2P20248 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCNA2P20248 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CCNA2P20248 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCNA2P20248 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCNA2P20248 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCNA2P20248 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.77□□□□□ -0.21
CCNA2P20248 NUS1P3-201ENST00000423502 862 ntBASIC13.77□□□□□ -0.21
CCNA2P20248 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCNA2P20248 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.77□□□□□ -0.21
CCNA2P20248 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCNA2P20248 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCNA2P20248 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms