Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ATP2B1P20020 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2B1P20020 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2B1P20020 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2B1P20020 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2B1P20020 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2B1P20020 E2F3P2-201ENST00000447755 1422 ntBASIC16.79■□□□□ 0.28
ATP2B1P20020 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2B1P20020 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2B1P20020 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
ATP2B1P20020 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2B1P20020 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2B1P20020 MEX3B-202ENST00000558133 4333 ntBASIC16.78■□□□□ 0.28
ATP2B1P20020 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2B1P20020 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2B1P20020 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2B1P20020 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2B1P20020 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2B1P20020 AL590440.2-201ENST00000641973 1595 ntBASIC16.78■□□□□ 0.28
ATP2B1P20020 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2B1P20020 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
ATP2B1P20020 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2B1P20020 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2B1P20020 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2B1P20020 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
ATP2B1P20020 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP2B1P20020 PEG13-201ENST00000631594 5667 ntBASIC16.78■□□□□ 0.28
ATP2B1P20020 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2B1P20020 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2B1P20020 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.78■□□□□ 0.28
ATP2B1P20020 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ATP2B1P20020 AC119751.2-201ENST00000504529 210 ntBASIC16.78■□□□□ 0.28
ATP2B1P20020 ALG3P1-201ENST00000508806 1114 ntBASIC16.78■□□□□ 0.28
ATP2B1P20020 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
ATP2B1P20020 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.78■□□□□ 0.28
ATP2B1P20020 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP2B1P20020 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.78■□□□□ 0.28
ATP2B1P20020 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP2B1P20020 AC027601.3-201ENST00000622907 509 ntBASIC16.78■□□□□ 0.28
ATP2B1P20020 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.78■□□□□ 0.28
ATP2B1P20020 AC008687.7-202ENST00000637404 953 ntBASIC16.78■□□□□ 0.28
ATP2B1P20020 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ATP2B1P20020 COX11-210ENST00000639671 696 ntBASIC16.78■□□□□ 0.28
ATP2B1P20020 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP2B1P20020 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2B1P20020 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ATP2B1P20020 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2B1P20020 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC16.78■□□□□ 0.28
ATP2B1P20020 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2B1P20020 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2B1P20020 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2B1P20020 DMBT1P1-203ENST00000636837 4628 ntBASIC16.78■□□□□ 0.28
ATP2B1P20020 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2B1P20020 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2B1P20020 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP2B1P20020 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC16.78■□□□□ 0.28
ATP2B1P20020 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2B1P20020 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2B1P20020 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2B1P20020 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP2B1P20020 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2B1P20020 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2B1P20020 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP2B1P20020 AC090505.1-201ENST00000430515 1834 ntBASIC16.77■□□□□ 0.28
ATP2B1P20020 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2B1P20020 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2B1P20020 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2B1P20020 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2B1P20020 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2B1P20020 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ATP2B1P20020 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2B1P20020 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
ATP2B1P20020 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2B1P20020 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2B1P20020 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
ATP2B1P20020 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2B1P20020 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2B1P20020 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2B1P20020 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
ATP2B1P20020 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2B1P20020 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.77■□□□□ 0.28
ATP2B1P20020 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2B1P20020 AL355994.2-201ENST00000447882 704 ntBASIC16.77■□□□□ 0.28
ATP2B1P20020 KRT223P-202ENST00000449164 1292 ntBASIC16.77■□□□□ 0.28
ATP2B1P20020 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP2B1P20020 AC100850.1-201ENST00000506768 649 ntBASIC16.77■□□□□ 0.28
ATP2B1P20020 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2B1P20020 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.77■□□□□ 0.28
ATP2B1P20020 AL359881.2-201ENST00000602973 570 ntBASIC16.77■□□□□ 0.28
ATP2B1P20020 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2B1P20020 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2B1P20020 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP2B1P20020 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP2B1P20020 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.77■□□□□ 0.27
ATP2B1P20020 HSPA8P5-201ENST00000456928 2069 ntBASIC16.77■□□□□ 0.27
ATP2B1P20020 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP2B1P20020 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP2B1P20020 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ATP2B1P20020 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.77■□□□□ 0.27
ATP2B1P20020 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms