Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SFTPBP07988 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SFTPBP07988 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
SFTPBP07988 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SFTPBP07988 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SFTPBP07988 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SFTPBP07988 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SFTPBP07988 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.72□□□□□ -0.37
SFTPBP07988 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SFTPBP07988 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SFTPBP07988 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SFTPBP07988 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.72□□□□□ -0.37
SFTPBP07988 AC079776.1-201ENST00000401540 1152 ntBASIC12.72□□□□□ -0.37
SFTPBP07988 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SFTPBP07988 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.72□□□□□ -0.37
SFTPBP07988 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.72□□□□□ -0.37
SFTPBP07988 ACA64.2-201ENST00000459014 129 ntBASIC12.72□□□□□ -0.37
SFTPBP07988 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC12.72□□□□□ -0.37
SFTPBP07988 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.72□□□□□ -0.37
SFTPBP07988 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.72□□□□□ -0.37
SFTPBP07988 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SFTPBP07988 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SFTPBP07988 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.72□□□□□ -0.37
SFTPBP07988 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SFTPBP07988 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.72□□□□□ -0.37
SFTPBP07988 AC015936.2-201ENST00000593177 259 ntBASIC12.72□□□□□ -0.37
SFTPBP07988 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.72□□□□□ -0.37
SFTPBP07988 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SFTPBP07988 AC005252.2-201ENST00000624630 1141 ntBASIC12.72□□□□□ -0.37
SFTPBP07988 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.72□□□□□ -0.37
SFTPBP07988 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.72□□□□□ -0.37
SFTPBP07988 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.72□□□□□ -0.37
SFTPBP07988 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.72□□□□□ -0.37
SFTPBP07988 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.72□□□□□ -0.37
SFTPBP07988 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SFTPBP07988 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SFTPBP07988 DGCR9-201ENST00000609630 2415 ntBASIC12.72□□□□□ -0.37
SFTPBP07988 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SFTPBP07988 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.72□□□□□ -0.37
SFTPBP07988 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SFTPBP07988 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SFTPBP07988 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
SFTPBP07988 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.72□□□□□ -0.37
SFTPBP07988 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.71□□□□□ -0.37
SFTPBP07988 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPBP07988 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SFTPBP07988 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPBP07988 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPBP07988 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
SFTPBP07988 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPBP07988 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPBP07988 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPBP07988 AL356585.2-201ENST00000625078 2396 ntBASIC12.71□□□□□ -0.37
SFTPBP07988 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPBP07988 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
SFTPBP07988 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.71□□□□□ -0.37
SFTPBP07988 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPBP07988 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPBP07988 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
SFTPBP07988 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPBP07988 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPBP07988 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPBP07988 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPBP07988 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.71□□□□□ -0.37
SFTPBP07988 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.71□□□□□ -0.37
SFTPBP07988 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
SFTPBP07988 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPBP07988 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.71□□□□□ -0.37
SFTPBP07988 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SFTPBP07988 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.71□□□□□ -0.37
SFTPBP07988 CROCCP4-201ENST00000457096 498 ntBASIC12.71□□□□□ -0.37
SFTPBP07988 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPBP07988 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.71□□□□□ -0.37
SFTPBP07988 USP32P1-208ENST00000506594 1164 ntBASIC12.71□□□□□ -0.37
SFTPBP07988 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.71□□□□□ -0.37
SFTPBP07988 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
SFTPBP07988 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.71□□□□□ -0.37
SFTPBP07988 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
SFTPBP07988 ENPP7P5-201ENST00000541031 1031 ntBASIC12.71□□□□□ -0.37
SFTPBP07988 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.71□□□□□ -0.37
SFTPBP07988 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12.71□□□□□ -0.37
SFTPBP07988 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.71□□□□□ -0.37
SFTPBP07988 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.71□□□□□ -0.37
SFTPBP07988 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.71□□□□□ -0.37
SFTPBP07988 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SFTPBP07988 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.71□□□□□ -0.37
SFTPBP07988 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.71□□□□□ -0.37
SFTPBP07988 AP005019.2-201ENST00000615104 511 ntBASIC12.71□□□□□ -0.37
SFTPBP07988 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.71□□□□□ -0.37
SFTPBP07988 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
SFTPBP07988 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SFTPBP07988 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
SFTPBP07988 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.71□□□□□ -0.38
SFTPBP07988 LRRC59-203ENST00000576448 1531 ntBASIC12.71□□□□□ -0.38
SFTPBP07988 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.71□□□□□ -0.38
SFTPBP07988 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SFTPBP07988 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SFTPBP07988 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
SFTPBP07988 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.71□□□□□ -0.38
SFTPBP07988 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms