Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TPM3P06753 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM3P06753 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.34■□□□□ 0.21
TPM3P06753 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.34■□□□□ 0.21
TPM3P06753 RARRES2P5-201ENST00000564013 466 ntBASIC16.34■□□□□ 0.21
TPM3P06753 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TPM3P06753 AL158211.3-201ENST00000607385 239 ntBASIC16.34■□□□□ 0.21
TPM3P06753 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM3P06753 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TPM3P06753 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.34■□□□□ 0.21
TPM3P06753 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.34■□□□□ 0.21
TPM3P06753 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TPM3P06753 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM3P06753 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TPM3P06753 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TPM3P06753 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC16.34■□□□□ 0.21
TPM3P06753 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM3P06753 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TPM3P06753 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.34■□□□□ 0.21
TPM3P06753 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.34■□□□□ 0.21
TPM3P06753 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM3P06753 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TPM3P06753 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TPM3P06753 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM3P06753 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TPM3P06753 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TPM3P06753 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC16.34■□□□□ 0.21
TPM3P06753 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM3P06753 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM3P06753 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM3P06753 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM3P06753 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM3P06753 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TPM3P06753 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TPM3P06753 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC16.33■□□□□ 0.21
TPM3P06753 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.33■□□□□ 0.21
TPM3P06753 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TPM3P06753 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC16.33■□□□□ 0.21
TPM3P06753 AP000437.1-201ENST00000624057 2085 ntBASIC16.33■□□□□ 0.21
TPM3P06753 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TPM3P06753 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPM3P06753 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TPM3P06753 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPM3P06753 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC16.33■□□□□ 0.2
TPM3P06753 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
TPM3P06753 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPM3P06753 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPM3P06753 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.33■□□□□ 0.2
TPM3P06753 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.33■□□□□ 0.2
TPM3P06753 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.33■□□□□ 0.2
TPM3P06753 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.33■□□□□ 0.2
TPM3P06753 AP006288.1-201ENST00000446065 395 ntBASIC16.33■□□□□ 0.2
TPM3P06753 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPM3P06753 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.33■□□□□ 0.2
TPM3P06753 AC067863.1-201ENST00000494933 530 ntBASIC16.33■□□□□ 0.2
TPM3P06753 AC026434.2-201ENST00000506094 1078 ntBASIC16.33■□□□□ 0.2
TPM3P06753 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPM3P06753 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.33■□□□□ 0.2
TPM3P06753 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC16.33■□□□□ 0.2
TPM3P06753 AC073957.3-201ENST00000609998 6758 ntBASIC16.33■□□□□ 0.2
TPM3P06753 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TPM3P06753 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TPM3P06753 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TPM3P06753 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
TPM3P06753 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPM3P06753 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPM3P06753 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TPM3P06753 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TPM3P06753 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPM3P06753 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPM3P06753 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TPM3P06753 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPM3P06753 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPM3P06753 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TPM3P06753 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC16.32■□□□□ 0.2
TPM3P06753 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TPM3P06753 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC16.32■□□□□ 0.2
TPM3P06753 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPM3P06753 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPM3P06753 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPM3P06753 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPM3P06753 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPM3P06753 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPM3P06753 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPM3P06753 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPM3P06753 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPM3P06753 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TPM3P06753 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TPM3P06753 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TPM3P06753 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TPM3P06753 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.32■□□□□ 0.2
TPM3P06753 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPM3P06753 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.32■□□□□ 0.2
TPM3P06753 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.32■□□□□ 0.2
TPM3P06753 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
TPM3P06753 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.32■□□□□ 0.2
TPM3P06753 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.32■□□□□ 0.2
TPM3P06753 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.32■□□□□ 0.2
TPM3P06753 AC114812.1-204ENST00000449669 728 ntBASIC16.32■□□□□ 0.2
TPM3P06753 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms