Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
MYCNP04198 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 CPO-201ENST00000272852 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
MYCNP04198 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 NUS1P3-201ENST00000423502 862 ntBASIC17.37■□□□□ 0.37
MYCNP04198 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 NPM1P49-201ENST00000448027 714 ntBASIC17.37■□□□□ 0.37
MYCNP04198 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.37■□□□□ 0.37
MYCNP04198 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.37■□□□□ 0.37
MYCNP04198 AC002384.1-202ENST00000470135 673 ntTSL 5 BASIC17.37■□□□□ 0.37
MYCNP04198 AC091804.1-201ENST00000486888 567 ntBASIC17.37■□□□□ 0.37
MYCNP04198 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
MYCNP04198 AC108475.1-201ENST00000507880 950 ntBASIC17.37■□□□□ 0.37
MYCNP04198 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.37■□□□□ 0.37
MYCNP04198 NSD1-211ENST00000511258 809 ntTSL 3 BASIC17.37■□□□□ 0.37
MYCNP04198 SDHD-205ENST00000528048 905 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 AC068339.2-201ENST00000534395 618 ntBASIC17.37■□□□□ 0.37
MYCNP04198 EMP1-206ENST00000537612 505 ntTSL 3 BASIC17.37■□□□□ 0.37
MYCNP04198 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 AC073651.1-201ENST00000544015 465 ntTSL 3 BASIC17.37■□□□□ 0.37
MYCNP04198 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC17.37■□□□□ 0.37
MYCNP04198 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.37■□□□□ 0.37
MYCNP04198 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC17.37■□□□□ 0.37
MYCNP04198 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC17.37■□□□□ 0.37
MYCNP04198 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.37■□□□□ 0.37
MYCNP04198 AC108865.2-201ENST00000606881 432 ntBASIC17.37■□□□□ 0.37
MYCNP04198 AC073529.1-202ENST00000608576 1080 ntTSL 5 BASIC17.37■□□□□ 0.37
MYCNP04198 AC010271.2-201ENST00000614440 588 ntBASIC17.37■□□□□ 0.37
MYCNP04198 AP003485.2-201ENST00000623636 610 ntBASIC17.37■□□□□ 0.37
MYCNP04198 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.37■□□□□ 0.37
MYCNP04198 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.37■□□□□ 0.37
MYCNP04198 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC17.37■□□□□ 0.37
MYCNP04198 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.37■□□□□ 0.37
MYCNP04198 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
MYCNP04198 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
MYCNP04198 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.37■□□□□ 0.37
MYCNP04198 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
MYCNP04198 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.37■□□□□ 0.37
MYCNP04198 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.37■□□□□ 0.37
MYCNP04198 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
MYCNP04198 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
MYCNP04198 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MYCNP04198 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MYCNP04198 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MYCNP04198 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MYCNP04198 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
MYCNP04198 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MYCNP04198 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MYCNP04198 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.36■□□□□ 0.37
MYCNP04198 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.36■□□□□ 0.37
MYCNP04198 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
MYCNP04198 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
MYCNP04198 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MYCNP04198 TEX47-201ENST00000297203 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MYCNP04198 CD244-201ENST00000322302 921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MYCNP04198 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC17.36■□□□□ 0.37
MYCNP04198 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
MYCNP04198 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.36■□□□□ 0.37
MYCNP04198 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MYCNP04198 AL133267.1-201ENST00000398220 340 ntBASIC17.36■□□□□ 0.37
MYCNP04198 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
MYCNP04198 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.36■□□□□ 0.37
MYCNP04198 AC107081.1-201ENST00000414975 361 ntBASIC17.36■□□□□ 0.37
MYCNP04198 HINT2P1-201ENST00000419438 481 ntBASIC17.36■□□□□ 0.37
MYCNP04198 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.36■□□□□ 0.37
MYCNP04198 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MYCNP04198 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.36■□□□□ 0.37
MYCNP04198 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.36■□□□□ 0.37
MYCNP04198 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC17.36■□□□□ 0.37
MYCNP04198 CAMTA1-210ENST00000476864 714 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MYCNP04198 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC17.36■□□□□ 0.37
MYCNP04198 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.36■□□□□ 0.37
MYCNP04198 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.36■□□□□ 0.37
MYCNP04198 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MYCNP04198 AC105129.2-201ENST00000559536 390 ntBASIC17.36■□□□□ 0.37
MYCNP04198 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.36■□□□□ 0.37
MYCNP04198 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.36■□□□□ 0.37
MYCNP04198 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.36■□□□□ 0.37
MYCNP04198 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.36■□□□□ 0.37
MYCNP04198 AC018638.7-201ENST00000605836 1114 ntBASIC17.36■□□□□ 0.37
MYCNP04198 AC079766.1-201ENST00000608774 427 ntBASIC17.36■□□□□ 0.37
MYCNP04198 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms