Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
MT-ND1P03886 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.75□□□□□ -0.21
MT-ND1P03886 AC093214.1-201ENST00000511688 1107 ntBASIC13.75□□□□□ -0.21
MT-ND1P03886 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.75□□□□□ -0.21
MT-ND1P03886 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.75□□□□□ -0.21
MT-ND1P03886 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.75□□□□□ -0.21
MT-ND1P03886 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
MT-ND1P03886 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.75□□□□□ -0.21
MT-ND1P03886 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.75□□□□□ -0.21
MT-ND1P03886 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.75□□□□□ -0.21
MT-ND1P03886 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.75□□□□□ -0.21
MT-ND1P03886 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
MT-ND1P03886 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.75□□□□□ -0.21
MT-ND1P03886 BX539320.1-201ENST00000623759 877 ntBASIC13.75□□□□□ -0.21
MT-ND1P03886 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
MT-ND1P03886 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MT-ND1P03886 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
MT-ND1P03886 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MT-ND1P03886 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
MT-ND1P03886 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.75□□□□□ -0.21
MT-ND1P03886 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
MT-ND1P03886 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.75□□□□□ -0.21
MT-ND1P03886 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
MT-ND1P03886 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MT-ND1P03886 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MT-ND1P03886 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.75□□□□□ -0.21
MT-ND1P03886 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MT-ND1P03886 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MT-ND1P03886 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MT-ND1P03886 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.75□□□□□ -0.21
MT-ND1P03886 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
MT-ND1P03886 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
MT-ND1P03886 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.74□□□□□ -0.21
MT-ND1P03886 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
MT-ND1P03886 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.74□□□□□ -0.21
MT-ND1P03886 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.74□□□□□ -0.21
MT-ND1P03886 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MT-ND1P03886 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.74□□□□□ -0.21
MT-ND1P03886 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
MT-ND1P03886 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
MT-ND1P03886 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC13.74□□□□□ -0.21
MT-ND1P03886 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
MT-ND1P03886 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MT-ND1P03886 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
MT-ND1P03886 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MT-ND1P03886 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
MT-ND1P03886 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MT-ND1P03886 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.74□□□□□ -0.21
MT-ND1P03886 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MT-ND1P03886 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
MT-ND1P03886 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
MT-ND1P03886 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MT-ND1P03886 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MT-ND1P03886 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
MT-ND1P03886 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
MT-ND1P03886 AC004945.1-201ENST00000416738 983 ntBASIC13.74□□□□□ -0.21
MT-ND1P03886 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC13.74□□□□□ -0.21
MT-ND1P03886 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.74□□□□□ -0.21
MT-ND1P03886 AC022616.1-201ENST00000518688 554 ntBASIC13.74□□□□□ -0.21
MT-ND1P03886 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
MT-ND1P03886 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.74□□□□□ -0.21
MT-ND1P03886 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
MT-ND1P03886 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.74□□□□□ -0.21
MT-ND1P03886 SPDYE22P-201ENST00000582158 798 ntBASIC13.74□□□□□ -0.21
MT-ND1P03886 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.74□□□□□ -0.21
MT-ND1P03886 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MT-ND1P03886 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.74□□□□□ -0.21
MT-ND1P03886 PRSS30P-206ENST00000641773 873 ntBASIC13.74□□□□□ -0.21
MT-ND1P03886 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
MT-ND1P03886 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
MT-ND1P03886 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
MT-ND1P03886 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
MT-ND1P03886 BEND3P3-201ENST00000611030 2440 ntBASIC13.74□□□□□ -0.21
MT-ND1P03886 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.74□□□□□ -0.21
MT-ND1P03886 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
MT-ND1P03886 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
MT-ND1P03886 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.74□□□□□ -0.21
MT-ND1P03886 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
MT-ND1P03886 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
MT-ND1P03886 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
MT-ND1P03886 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
MT-ND1P03886 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
MT-ND1P03886 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MT-ND1P03886 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
MT-ND1P03886 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MT-ND1P03886 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
MT-ND1P03886 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.74□□□□□ -0.21
MT-ND1P03886 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.74□□□□□ -0.21
MT-ND1P03886 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MT-ND1P03886 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.73□□□□□ -0.21
MT-ND1P03886 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
MT-ND1P03886 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.73□□□□□ -0.21
MT-ND1P03886 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
MT-ND1P03886 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
MT-ND1P03886 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
MT-ND1P03886 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MT-ND1P03886 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.73□□□□□ -0.21
MT-ND1P03886 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.73□□□□□ -0.21
MT-ND1P03886 INTS4P2-202ENST00000614726 2019 ntBASIC13.73□□□□□ -0.21
MT-ND1P03886 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms