Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC011474.4-201ENST00000623523 2076 ntBASIC14.64□□□□□ -0.07
GPC4O75487 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
GPC4O75487 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GPC4O75487 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
GPC4O75487 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GPC4O75487 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GPC4O75487 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GPC4O75487 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GPC4O75487 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
GPC4O75487 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
GPC4O75487 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GPC4O75487 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
GPC4O75487 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
GPC4O75487 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.63□□□□□ -0.07
GPC4O75487 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
GPC4O75487 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GPC4O75487 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GPC4O75487 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.63□□□□□ -0.07
GPC4O75487 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.63□□□□□ -0.07
GPC4O75487 MBLAC2-202ENST00000514906 1936 ntBASIC14.63□□□□□ -0.07
GPC4O75487 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC14.63□□□□□ -0.07
GPC4O75487 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GPC4O75487 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GPC4O75487 AGGF1P1-201ENST00000509500 2073 ntBASIC14.63□□□□□ -0.07
GPC4O75487 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
GPC4O75487 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GPC4O75487 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GPC4O75487 ANKRD19P-201ENST00000338192 862 ntBASIC14.63□□□□□ -0.07
GPC4O75487 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GPC4O75487 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GPC4O75487 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GPC4O75487 RN7SKP175-201ENST00000408472 289 ntBASIC14.63□□□□□ -0.07
GPC4O75487 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GPC4O75487 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.63□□□□□ -0.07
GPC4O75487 AC234783.1-201ENST00000441761 496 ntBASIC14.63□□□□□ -0.07
GPC4O75487 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.63□□□□□ -0.07
GPC4O75487 GCOM2-201ENST00000509133 1104 ntBASIC14.63□□□□□ -0.07
GPC4O75487 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.63□□□□□ -0.07
GPC4O75487 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
GPC4O75487 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
GPC4O75487 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.63□□□□□ -0.07
GPC4O75487 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.63□□□□□ -0.07
GPC4O75487 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
GPC4O75487 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GPC4O75487 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GPC4O75487 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GPC4O75487 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GPC4O75487 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
GPC4O75487 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GPC4O75487 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GPC4O75487 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
GPC4O75487 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GPC4O75487 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.63□□□□□ -0.07
GPC4O75487 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
GPC4O75487 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.63□□□□□ -0.07
GPC4O75487 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
GPC4O75487 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
GPC4O75487 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
GPC4O75487 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
GPC4O75487 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
GPC4O75487 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.62□□□□□ -0.07
GPC4O75487 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
GPC4O75487 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GPC4O75487 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
GPC4O75487 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
GPC4O75487 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GPC4O75487 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.62□□□□□ -0.07
GPC4O75487 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GPC4O75487 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GPC4O75487 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
GPC4O75487 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GPC4O75487 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GPC4O75487 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GPC4O75487 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GPC4O75487 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GPC4O75487 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.62□□□□□ -0.07
GPC4O75487 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GPC4O75487 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
GPC4O75487 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
GPC4O75487 MIR1909-201ENST00000411312 80 ntBASIC14.62□□□□□ -0.07
GPC4O75487 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.62□□□□□ -0.07
GPC4O75487 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
GPC4O75487 KLF2P4-201ENST00000451959 1225 ntBASIC14.62□□□□□ -0.07
GPC4O75487 CTBP2P5-201ENST00000454986 1264 ntBASIC14.62□□□□□ -0.07
GPC4O75487 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.62□□□□□ -0.07
GPC4O75487 ALG3P1-201ENST00000508806 1114 ntBASIC14.62□□□□□ -0.07
GPC4O75487 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.62□□□□□ -0.07
GPC4O75487 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
GPC4O75487 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.62□□□□□ -0.07
GPC4O75487 SNX29P1-201ENST00000548357 1007 ntBASIC14.62□□□□□ -0.07
GPC4O75487 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GPC4O75487 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.62□□□□□ -0.07
GPC4O75487 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.62□□□□□ -0.07
GPC4O75487 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.62□□□□□ -0.07
GPC4O75487 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.62□□□□□ -0.07
GPC4O75487 OR10B1P-201ENST00000601666 907 ntBASIC14.62□□□□□ -0.07
GPC4O75487 BX088702.1-201ENST00000610784 235 ntBASIC14.62□□□□□ -0.07
GPC4O75487 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
GPC4O75487 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GPC4O75487 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms