Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC3O60481 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC3O60481 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC3O60481 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
ZIC3O60481 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.98□□□□□ -0.33
ZIC3O60481 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
ZIC3O60481 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ZIC3O60481 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
ZIC3O60481 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
ZIC3O60481 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC12.98□□□□□ -0.33
ZIC3O60481 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
ZIC3O60481 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC12.98□□□□□ -0.33
ZIC3O60481 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.98□□□□□ -0.33
ZIC3O60481 ELK2AP-201ENST00000392510 1007 ntBASIC12.98□□□□□ -0.33
ZIC3O60481 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC12.98□□□□□ -0.33
ZIC3O60481 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.98□□□□□ -0.33
ZIC3O60481 DUX4L50-201ENST00000455245 715 ntBASIC12.98□□□□□ -0.33
ZIC3O60481 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 AC245884.6-201ENST00000515672 1067 ntBASIC12.98□□□□□ -0.33
ZIC3O60481 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.98□□□□□ -0.33
ZIC3O60481 AC093752.3-201ENST00000567343 901 ntBASIC12.98□□□□□ -0.33
ZIC3O60481 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.98□□□□□ -0.33
ZIC3O60481 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.98□□□□□ -0.33
ZIC3O60481 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC12.98□□□□□ -0.33
ZIC3O60481 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 AL353770.1-201ENST00000614915 403 ntBASIC12.98□□□□□ -0.33
ZIC3O60481 AC091812.3-201ENST00000621362 345 ntBASIC12.98□□□□□ -0.33
ZIC3O60481 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
ZIC3O60481 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.98□□□□□ -0.33
ZIC3O60481 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
ZIC3O60481 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ZIC3O60481 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ZIC3O60481 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ZIC3O60481 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.98□□□□□ -0.33
ZIC3O60481 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC3O60481 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
ZIC3O60481 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC3O60481 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.97□□□□□ -0.33
ZIC3O60481 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
ZIC3O60481 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.97□□□□□ -0.33
ZIC3O60481 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC3O60481 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.97□□□□□ -0.33
ZIC3O60481 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC3O60481 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC3O60481 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
ZIC3O60481 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC3O60481 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC3O60481 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC3O60481 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
ZIC3O60481 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.97□□□□□ -0.33
ZIC3O60481 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC3O60481 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC3O60481 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC3O60481 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC3O60481 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC3O60481 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC3O60481 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC3O60481 BANF1P3-201ENST00000412556 261 ntBASIC12.97□□□□□ -0.33
ZIC3O60481 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC3O60481 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC3O60481 RN7SL277P-201ENST00000481521 288 ntBASIC12.97□□□□□ -0.33
ZIC3O60481 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.97□□□□□ -0.33
ZIC3O60481 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC3O60481 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC3O60481 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC12.97□□□□□ -0.33
ZIC3O60481 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms