Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 VDAC1P1-201ENST00000439229 848 ntBASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 AL035414.1-201ENST00000451327 857 ntBASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 HLA-J-204ENST00000495278 958 ntBASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 AC113367.3-201ENST00000508316 1912 ntBASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 LINC00552-201ENST00000625151 2579 ntBASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 AC140479.7-201ENST00000636301 2332 ntBASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 KRT8P19-201ENST00000551916 1455 ntBASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 AC022447.6-201ENST00000515522 438 ntBASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 AC134698.3-201ENST00000523880 214 ntBASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 AL161670.2-201ENST00000557650 1227 ntBASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 RN7SL574P-201ENST00000581512 297 ntBASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 AL132994.2-201ENST00000603120 687 ntBASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 Z98259.2-201ENST00000641583 609 ntBASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA2E9PIF3 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms