Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 FAM86HP-204ENST00000513466 959 ntBASIC12.78□□□□□ -0.36
NPIPB4C9JG80 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 HILS1-202ENST00000545329 423 ntBASIC12.78□□□□□ -0.36
NPIPB4C9JG80 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 CR392039.2-201ENST00000623182 509 ntBASIC12.78□□□□□ -0.36
NPIPB4C9JG80 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 AC018629.1-201ENST00000623381 1736 ntBASIC12.78□□□□□ -0.36
NPIPB4C9JG80 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.78□□□□□ -0.36
NPIPB4C9JG80 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 RPL13AP3-202ENST00000494676 1473 ntBASIC12.78□□□□□ -0.36
NPIPB4C9JG80 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NPIPB4C9JG80 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
NPIPB4C9JG80 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.77□□□□□ -0.36
NPIPB4C9JG80 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
NPIPB4C9JG80 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
NPIPB4C9JG80 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NPIPB4C9JG80 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NPIPB4C9JG80 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
NPIPB4C9JG80 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.77□□□□□ -0.36
NPIPB4C9JG80 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
NPIPB4C9JG80 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
NPIPB4C9JG80 AGAP10P-201ENST00000454844 2418 ntBASIC12.77□□□□□ -0.37
NPIPB4C9JG80 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 BTBD6P1-201ENST00000412176 1267 ntBASIC12.77□□□□□ -0.37
NPIPB4C9JG80 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 AC078875.1-201ENST00000431907 724 ntBASIC12.77□□□□□ -0.37
NPIPB4C9JG80 AC092580.1-201ENST00000433998 658 ntBASIC12.77□□□□□ -0.37
NPIPB4C9JG80 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 RPL18P13-201ENST00000478088 569 ntBASIC12.77□□□□□ -0.37
NPIPB4C9JG80 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 AC021723.1-201ENST00000486306 515 ntBASIC12.77□□□□□ -0.37
NPIPB4C9JG80 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 SCARNA21-201ENST00000517026 139 ntBASIC12.77□□□□□ -0.37
NPIPB4C9JG80 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 AC022748.3-201ENST00000621828 275 ntBASIC12.77□□□□□ -0.37
NPIPB4C9JG80 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.77□□□□□ -0.37
NPIPB4C9JG80 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms