Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 ANKRD19P-201ENST00000338192 862 ntBASIC13.17□□□□□ -0.3
TMEM129A0AVI4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 KRT43P-201ENST00000434019 910 ntBASIC13.17□□□□□ -0.3
TMEM129A0AVI4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 AC131206.1-201ENST00000538078 1211 ntBASIC13.17□□□□□ -0.3
TMEM129A0AVI4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 AP005019.2-201ENST00000615104 511 ntBASIC13.17□□□□□ -0.3
TMEM129A0AVI4 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 AC083964.2-201ENST00000623988 2396 ntBASIC13.17□□□□□ -0.3
TMEM129A0AVI4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 MIR658-201ENST00000385210 100 ntBASIC13.16□□□□□ -0.3
TMEM129A0AVI4 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 AC234783.1-201ENST00000441761 496 ntBASIC13.16□□□□□ -0.3
TMEM129A0AVI4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 AC026434.2-201ENST00000506094 1078 ntBASIC13.16□□□□□ -0.3
TMEM129A0AVI4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 MIR6805-201ENST00000615055 62 ntBASIC13.16□□□□□ -0.3
TMEM129A0AVI4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 BX539320.1-201ENST00000623759 877 ntBASIC13.16□□□□□ -0.3
TMEM129A0AVI4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM129A0AVI4 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms