Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 MIR7845-201ENST00000618396 99 ntBASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHB1Q9Y5F3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
PCDHB1Q9Y5F3 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.52□□□□□ -0.08
PCDHB1Q9Y5F3 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHB1Q9Y5F3 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHB1Q9Y5F3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
PCDHB1Q9Y5F3 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHB1Q9Y5F3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHB1Q9Y5F3 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.52□□□□□ -0.08
PCDHB1Q9Y5F3 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
PCDHB1Q9Y5F3 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
PCDHB1Q9Y5F3 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.52□□□□□ -0.08
PCDHB1Q9Y5F3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
PCDHB1Q9Y5F3 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.52□□□□□ -0.08
PCDHB1Q9Y5F3 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHB1Q9Y5F3 AC136759.1-202ENST00000530858 2194 ntBASIC14.52□□□□□ -0.08
PCDHB1Q9Y5F3 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 MAGEA5-201ENST00000446757 942 ntBASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 FTLP1-201ENST00000449155 526 ntBASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 RNMTL1P1-201ENST00000454103 560 ntBASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 AC024681.1-201ENST00000521917 487 ntBASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 PRKXP1-201ENST00000561423 1122 ntBASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 AC022748.3-201ENST00000621828 275 ntBASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHB1Q9Y5F3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHB1Q9Y5F3 TCAM1P-207ENST00000485295 1537 ntBASIC14.51□□□□□ -0.09
PCDHB1Q9Y5F3 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHB1Q9Y5F3 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PCDHB1Q9Y5F3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHB1Q9Y5F3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PCDHB1Q9Y5F3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHB1Q9Y5F3 AC011498.7-201ENST00000624986 2027 ntBASIC14.51□□□□□ -0.09
PCDHB1Q9Y5F3 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHB1Q9Y5F3 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.51□□□□□ -0.09
PCDHB1Q9Y5F3 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHB1Q9Y5F3 KRT8P29-201ENST00000420409 1371 ntBASIC14.51□□□□□ -0.09
PCDHB1Q9Y5F3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.51□□□□□ -0.09
PCDHB1Q9Y5F3 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PCDHB1Q9Y5F3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHB1Q9Y5F3 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHB1Q9Y5F3 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHB1Q9Y5F3 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC14.51□□□□□ -0.09
PCDHB1Q9Y5F3 AC092978.1-202ENST00000637590 1327 ntBASIC14.51□□□□□ -0.09
PCDHB1Q9Y5F3 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHB1Q9Y5F3 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHB1Q9Y5F3 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHB1Q9Y5F3 DPM3-202ENST00000368399 517 ntBASIC14.51□□□□□ -0.09
PCDHB1Q9Y5F3 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PCDHB1Q9Y5F3 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHB1Q9Y5F3 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.51□□□□□ -0.09
PCDHB1Q9Y5F3 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.51□□□□□ -0.09
PCDHB1Q9Y5F3 AL008707.1-201ENST00000422498 534 ntBASIC14.51□□□□□ -0.09
PCDHB1Q9Y5F3 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.51□□□□□ -0.09
PCDHB1Q9Y5F3 AC011742.3-201ENST00000439053 820 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms