Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHF8Q9UPP1 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHF8Q9UPP1 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC19.34■□□□□ 0.69
PHF8Q9UPP1 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHF8Q9UPP1 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PHF8Q9UPP1 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHF8Q9UPP1 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PHF8Q9UPP1 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
PHF8Q9UPP1 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PHF8Q9UPP1 SHMT1P1-201ENST00000419974 1312 ntBASIC19.34■□□□□ 0.69
PHF8Q9UPP1 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.34■□□□□ 0.69
PHF8Q9UPP1 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHF8Q9UPP1 AC103592.1-201ENST00000394513 664 ntBASIC19.34■□□□□ 0.69
PHF8Q9UPP1 OR2W2P-201ENST00000406313 909 ntBASIC19.34■□□□□ 0.69
PHF8Q9UPP1 LINP1-201ENST00000417112 917 ntTSL 2 BASIC19.34■□□□□ 0.69
PHF8Q9UPP1 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC19.34■□□□□ 0.69
PHF8Q9UPP1 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
PHF8Q9UPP1 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC19.34■□□□□ 0.69
PHF8Q9UPP1 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC19.34■□□□□ 0.69
PHF8Q9UPP1 AC132825.4-202ENST00000578792 434 ntBASIC19.34■□□□□ 0.69
PHF8Q9UPP1 AC005777.1-201ENST00000588332 187 ntBASIC19.34■□□□□ 0.69
PHF8Q9UPP1 AC073869.4-201ENST00000620841 800 ntBASIC19.34■□□□□ 0.69
PHF8Q9UPP1 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC19.34■□□□□ 0.69
PHF8Q9UPP1 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHF8Q9UPP1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHF8Q9UPP1 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PHF8Q9UPP1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHF8Q9UPP1 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHF8Q9UPP1 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PHF8Q9UPP1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHF8Q9UPP1 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHF8Q9UPP1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.33■□□□□ 0.69
PHF8Q9UPP1 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.33■□□□□ 0.69
PHF8Q9UPP1 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
PHF8Q9UPP1 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
PHF8Q9UPP1 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PHF8Q9UPP1 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PHF8Q9UPP1 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PHF8Q9UPP1 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PHF8Q9UPP1 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 AC106827.1-201ENST00000366454 431 ntBASIC19.33■□□□□ 0.68
PHF8Q9UPP1 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 SEPHS2P1-201ENST00000511618 1162 ntBASIC19.33■□□□□ 0.68
PHF8Q9UPP1 IGHEP2-201ENST00000519308 1256 ntBASIC19.33■□□□□ 0.68
PHF8Q9UPP1 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 AL031673.1-201ENST00000611460 466 ntBASIC19.33■□□□□ 0.68
PHF8Q9UPP1 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHF8Q9UPP1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 RN7SL371P-201ENST00000578099 267 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms