Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.9■□□□□ 0.14
L1RE1Q9UN81 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
L1RE1Q9UN81 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
L1RE1Q9UN81 AC018735.1-201ENST00000437208 1502 ntBASIC15.9■□□□□ 0.14
L1RE1Q9UN81 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
L1RE1Q9UN81 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.9■□□□□ 0.14
L1RE1Q9UN81 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
L1RE1Q9UN81 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
L1RE1Q9UN81 AC090505.1-201ENST00000430515 1834 ntBASIC15.9■□□□□ 0.14
L1RE1Q9UN81 AL354702.1-201ENST00000442006 1960 ntBASIC15.9■□□□□ 0.14
L1RE1Q9UN81 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.9■□□□□ 0.14
L1RE1Q9UN81 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
L1RE1Q9UN81 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.9■□□□□ 0.14
L1RE1Q9UN81 AC104306.2-201ENST00000451877 341 ntBASIC15.9■□□□□ 0.14
L1RE1Q9UN81 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
L1RE1Q9UN81 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
L1RE1Q9UN81 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.9■□□□□ 0.14
L1RE1Q9UN81 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.9■□□□□ 0.14
L1RE1Q9UN81 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
L1RE1Q9UN81 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.9■□□□□ 0.14
L1RE1Q9UN81 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.9■□□□□ 0.14
L1RE1Q9UN81 MIR4783-201ENST00000580343 82 ntBASIC15.9■□□□□ 0.14
L1RE1Q9UN81 AL118558.3-201ENST00000607414 1079 ntBASIC15.9■□□□□ 0.14
L1RE1Q9UN81 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.9■□□□□ 0.14
L1RE1Q9UN81 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
L1RE1Q9UN81 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
L1RE1Q9UN81 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
L1RE1Q9UN81 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
L1RE1Q9UN81 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
L1RE1Q9UN81 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC15.9■□□□□ 0.14
L1RE1Q9UN81 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
L1RE1Q9UN81 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.9■□□□□ 0.14
L1RE1Q9UN81 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
L1RE1Q9UN81 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.14
L1RE1Q9UN81 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.89■□□□□ 0.14
L1RE1Q9UN81 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.89■□□□□ 0.14
L1RE1Q9UN81 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 AL354877.1-201ENST00000424412 413 ntBASIC15.89■□□□□ 0.13
L1RE1Q9UN81 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 ZNF767P-206ENST00000513792 565 ntBASIC15.89■□□□□ 0.13
L1RE1Q9UN81 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 AC005730.2-201ENST00000564549 1184 ntBASIC15.89■□□□□ 0.13
L1RE1Q9UN81 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 AL008638.5-201ENST00000623814 1298 ntBASIC15.89■□□□□ 0.13
L1RE1Q9UN81 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 AC023794.5-201ENST00000564380 2157 ntBASIC15.89■□□□□ 0.13
L1RE1Q9UN81 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
L1RE1Q9UN81 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.88■□□□□ 0.13
L1RE1Q9UN81 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.88■□□□□ 0.13
L1RE1Q9UN81 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC15.88■□□□□ 0.13
L1RE1Q9UN81 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
L1RE1Q9UN81 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
L1RE1Q9UN81 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
L1RE1Q9UN81 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
L1RE1Q9UN81 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
L1RE1Q9UN81 USP31-203ENST00000567975 2142 ntTSL 2 BASIC15.88■□□□□ 0.13
L1RE1Q9UN81 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
L1RE1Q9UN81 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
L1RE1Q9UN81 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
L1RE1Q9UN81 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
L1RE1Q9UN81 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
L1RE1Q9UN81 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
L1RE1Q9UN81 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
L1RE1Q9UN81 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
L1RE1Q9UN81 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
L1RE1Q9UN81 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
L1RE1Q9UN81 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
L1RE1Q9UN81 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
L1RE1Q9UN81 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
L1RE1Q9UN81 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.88■□□□□ 0.13
L1RE1Q9UN81 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms