Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 AC138951.2-201ENST00000623455 1161 ntBASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 AL035252.4-201ENST00000624174 288 ntBASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 RHOXF1P1-202ENST00000635473 501 ntBASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 AL354989.2-201ENST00000435838 1540 ntBASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 ZEB1-AS1-208ENST00000607166 2503 ntBASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 FUK-202ENST00000378912 3925 ntTSL 2 BASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
LINC00474Q9P2X8 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 AC092117.1-201ENST00000621230 3250 ntBASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 MPI-203ENST00000535694 1523 ntTSL 2 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 SLC6A6P1-201ENST00000413933 1850 ntBASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 MPV17-205ENST00000402310 906 ntTSL 5 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 ARSEP1-201ENST00000420443 635 ntBASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 FAM8A4P-201ENST00000435433 1213 ntBASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 MESTP3-201ENST00000503460 968 ntBASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 RPL8-205ENST00000527914 551 ntTSL 3 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 VPS18-202ENST00000558474 873 ntTSL 3 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 IGHV3-72-202ENST00000621503 303 ntBASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 AC006453.4-201ENST00000636949 1252 ntBASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
LINC00474Q9P2X8 AC131902.2-201ENST00000566892 2172 ntBASIC9.58□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms