Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.21■□□□□ 0.19
COL20A1Q9P218 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.21■□□□□ 0.19
COL20A1Q9P218 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL20A1Q9P218 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL20A1Q9P218 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
COL20A1Q9P218 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
COL20A1Q9P218 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC16.21■□□□□ 0.19
COL20A1Q9P218 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL20A1Q9P218 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
COL20A1Q9P218 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
COL20A1Q9P218 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
COL20A1Q9P218 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
COL20A1Q9P218 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
COL20A1Q9P218 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL20A1Q9P218 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL20A1Q9P218 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL20A1Q9P218 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC16.2■□□□□ 0.18
COL20A1Q9P218 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL20A1Q9P218 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
COL20A1Q9P218 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL20A1Q9P218 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL20A1Q9P218 AL596257.1-201ENST00000641463 2694 ntBASIC16.2■□□□□ 0.18
COL20A1Q9P218 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL20A1Q9P218 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC16.2■□□□□ 0.18
COL20A1Q9P218 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL20A1Q9P218 HIST2H2BA-201ENST00000412169 381 ntBASIC16.2■□□□□ 0.18
COL20A1Q9P218 PFN2-202ENST00000423691 911 ntTSL 2 BASIC16.2■□□□□ 0.18
COL20A1Q9P218 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.2■□□□□ 0.18
COL20A1Q9P218 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL20A1Q9P218 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC16.2■□□□□ 0.18
COL20A1Q9P218 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC16.2■□□□□ 0.18
COL20A1Q9P218 RN7SL665P-201ENST00000578793 300 ntBASIC16.2■□□□□ 0.18
COL20A1Q9P218 MIR3180-2-201ENST00000581748 88 ntBASIC16.2■□□□□ 0.18
COL20A1Q9P218 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC16.2■□□□□ 0.18
COL20A1Q9P218 AC107464.3-201ENST00000609172 737 ntBASIC16.2■□□□□ 0.18
COL20A1Q9P218 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.2■□□□□ 0.18
COL20A1Q9P218 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL20A1Q9P218 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.2■□□□□ 0.18
COL20A1Q9P218 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL20A1Q9P218 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL20A1Q9P218 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL20A1Q9P218 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL20A1Q9P218 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL20A1Q9P218 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL20A1Q9P218 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC16.2■□□□□ 0.18
COL20A1Q9P218 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL20A1Q9P218 CICP16-201ENST00000502609 2813 ntBASIC16.2■□□□□ 0.18
COL20A1Q9P218 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL20A1Q9P218 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC16.2■□□□□ 0.18
COL20A1Q9P218 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL20A1Q9P218 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL20A1Q9P218 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
COL20A1Q9P218 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16.2■□□□□ 0.18
COL20A1Q9P218 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.2■□□□□ 0.18
COL20A1Q9P218 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL20A1Q9P218 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL20A1Q9P218 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.2■□□□□ 0.18
COL20A1Q9P218 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.2■□□□□ 0.18
COL20A1Q9P218 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL20A1Q9P218 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL20A1Q9P218 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
COL20A1Q9P218 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL20A1Q9P218 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.19■□□□□ 0.18
COL20A1Q9P218 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.19■□□□□ 0.18
COL20A1Q9P218 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC16.19■□□□□ 0.18
COL20A1Q9P218 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC16.19■□□□□ 0.18
COL20A1Q9P218 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
COL20A1Q9P218 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL20A1Q9P218 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.19■□□□□ 0.18
COL20A1Q9P218 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL20A1Q9P218 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL20A1Q9P218 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL20A1Q9P218 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL20A1Q9P218 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL20A1Q9P218 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL20A1Q9P218 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
COL20A1Q9P218 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL20A1Q9P218 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL20A1Q9P218 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL20A1Q9P218 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL20A1Q9P218 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL20A1Q9P218 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL20A1Q9P218 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.19■□□□□ 0.18
COL20A1Q9P218 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL20A1Q9P218 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL20A1Q9P218 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.19■□□□□ 0.18
COL20A1Q9P218 GUSBP10-201ENST00000417412 665 ntBASIC16.19■□□□□ 0.18
COL20A1Q9P218 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC16.19■□□□□ 0.18
COL20A1Q9P218 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC16.19■□□□□ 0.18
COL20A1Q9P218 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.19■□□□□ 0.18
COL20A1Q9P218 NAA40-205ENST00000539656 577 ntTSL 4 BASIC16.19■□□□□ 0.18
COL20A1Q9P218 KLF17P1-201ENST00000547105 1126 ntBASIC16.19■□□□□ 0.18
COL20A1Q9P218 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC16.19■□□□□ 0.18
COL20A1Q9P218 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL20A1Q9P218 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
COL20A1Q9P218 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
COL20A1Q9P218 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.19■□□□□ 0.18
COL20A1Q9P218 AC087392.5-201ENST00000612517 489 ntBASIC16.19■□□□□ 0.18
COL20A1Q9P218 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL20A1Q9P218 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms