Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 TMBIM7P-202ENST00000641474 1516 ntBASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 AC009093.10-201ENST00000641956 1442 ntBASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 HINT2P1-201ENST00000419438 481 ntBASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 AL591846.1-201ENST00000451736 433 ntBASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 MIR4722-201ENST00000578292 60 ntBASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 AC020914.3-201ENST00000594712 304 ntBASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 AL008638.5-201ENST00000623814 1298 ntBASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CUEDC1Q9NWM3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 AL157407.1-201ENST00000435784 904 ntBASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 SORD2P-201ENST00000558556 1069 ntBASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 AC104982.3-201ENST00000581995 514 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms