Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 BOLA2P3-201ENST00000404566 256 ntBASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 AC135782.3-201ENST00000562782 2105 ntBASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 AC008735.3-201ENST00000596646 500 ntBASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 TMEM261P1-201ENST00000604899 340 ntBASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 AC015688.4-201ENST00000580780 1647 ntBASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 SALL4P5-201ENST00000419001 1760 ntBASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 KHSRPP1-201ENST00000427983 1768 ntBASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 AL365181.3-201ENST00000605886 3222 ntBASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 SDHAP3-202ENST00000515467 728 ntBASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 AC093726.1-201ENST00000608064 963 ntBASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms