Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.43■□□□□ 0.06
CISHQ9NSE2 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.43■□□□□ 0.06
CISHQ9NSE2 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CISHQ9NSE2 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.43■□□□□ 0.06
CISHQ9NSE2 MARK2P5-201ENST00000507649 634 ntBASIC15.43■□□□□ 0.06
CISHQ9NSE2 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.43■□□□□ 0.06
CISHQ9NSE2 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
CISHQ9NSE2 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.43■□□□□ 0.06
CISHQ9NSE2 AL132994.2-201ENST00000603120 687 ntBASIC15.43■□□□□ 0.06
CISHQ9NSE2 AL591471.1-201ENST00000621855 229 ntBASIC15.43■□□□□ 0.06
CISHQ9NSE2 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.43■□□□□ 0.06
CISHQ9NSE2 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.43■□□□□ 0.06
CISHQ9NSE2 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CISHQ9NSE2 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
CISHQ9NSE2 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CISHQ9NSE2 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.43■□□□□ 0.06
CISHQ9NSE2 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.43■□□□□ 0.06
CISHQ9NSE2 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.43■□□□□ 0.06
CISHQ9NSE2 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CISHQ9NSE2 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CISHQ9NSE2 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CISHQ9NSE2 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CISHQ9NSE2 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CISHQ9NSE2 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CISHQ9NSE2 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.43■□□□□ 0.06
CISHQ9NSE2 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CISHQ9NSE2 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CISHQ9NSE2 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CISHQ9NSE2 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.43■□□□□ 0.06
CISHQ9NSE2 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.43■□□□□ 0.06
CISHQ9NSE2 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.43■□□□□ 0.06
CISHQ9NSE2 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.43■□□□□ 0.06
CISHQ9NSE2 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CISHQ9NSE2 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CISHQ9NSE2 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CISHQ9NSE2 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CISHQ9NSE2 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CISHQ9NSE2 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CISHQ9NSE2 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CISHQ9NSE2 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CISHQ9NSE2 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CISHQ9NSE2 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CISHQ9NSE2 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CISHQ9NSE2 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CISHQ9NSE2 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CISHQ9NSE2 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CISHQ9NSE2 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
CISHQ9NSE2 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CISHQ9NSE2 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CISHQ9NSE2 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CISHQ9NSE2 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CISHQ9NSE2 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.42■□□□□ 0.06
CISHQ9NSE2 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.42■□□□□ 0.06
CISHQ9NSE2 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CISHQ9NSE2 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CISHQ9NSE2 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CISHQ9NSE2 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CISHQ9NSE2 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.42■□□□□ 0.06
CISHQ9NSE2 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.42■□□□□ 0.06
CISHQ9NSE2 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.42■□□□□ 0.06
CISHQ9NSE2 AP001258.2-201ENST00000529891 490 ntBASIC15.42■□□□□ 0.06
CISHQ9NSE2 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CISHQ9NSE2 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.42■□□□□ 0.06
CISHQ9NSE2 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.42■□□□□ 0.06
CISHQ9NSE2 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.42■□□□□ 0.06
CISHQ9NSE2 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.42■□□□□ 0.06
CISHQ9NSE2 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.42■□□□□ 0.06
CISHQ9NSE2 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.42■□□□□ 0.06
CISHQ9NSE2 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.42■□□□□ 0.06
CISHQ9NSE2 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CISHQ9NSE2 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CISHQ9NSE2 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CISHQ9NSE2 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CISHQ9NSE2 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CISHQ9NSE2 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CISHQ9NSE2 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.42■□□□□ 0.06
CISHQ9NSE2 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CISHQ9NSE2 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.42■□□□□ 0.06
CISHQ9NSE2 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.42■□□□□ 0.06
CISHQ9NSE2 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.42■□□□□ 0.06
CISHQ9NSE2 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CISHQ9NSE2 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CISHQ9NSE2 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CISHQ9NSE2 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CISHQ9NSE2 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.41■□□□□ 0.06
CISHQ9NSE2 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CISHQ9NSE2 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CISHQ9NSE2 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CISHQ9NSE2 MST1P2-201ENST00000457982 2291 ntBASIC15.41■□□□□ 0.06
CISHQ9NSE2 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CISHQ9NSE2 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CISHQ9NSE2 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CISHQ9NSE2 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CISHQ9NSE2 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CISHQ9NSE2 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CISHQ9NSE2 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.41■□□□□ 0.06
CISHQ9NSE2 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
CISHQ9NSE2 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CISHQ9NSE2 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.41■□□□□ 0.06
CISHQ9NSE2 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms