Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 NCLP1-201ENST00000445357 1963 ntBASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 AC245100.3-201ENST00000441281 285 ntBASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 AC011495.1-201ENST00000498085 584 ntBASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 AC139712.1-201ENST00000378256 1875 ntBASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 KHSRPP1-201ENST00000427983 1768 ntBASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 RN7SL752P-201ENST00000463779 287 ntBASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 AC017083.2-201ENST00000608069 979 ntBASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 AP001002.3-201ENST00000623482 206 ntBASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms