Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 DEF8-202ENST00000418391 852 ntTSL 2 BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 AC016700.1-201ENST00000429424 312 ntBASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 AL157407.1-201ENST00000435784 904 ntBASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 AC005077.2-201ENST00000449786 690 ntBASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 MARK2P5-201ENST00000507649 634 ntBASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 ACTG1P17-201ENST00000558391 1119 ntBASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 CICP14-201ENST00000629111 2732 ntBASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 AC009093.10-201ENST00000641956 1442 ntBASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 MBLAC2-202ENST00000514906 1936 ntBASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 AL590440.2-201ENST00000641973 1595 ntBASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 AC139712.1-201ENST00000378256 1875 ntBASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 AC015688.4-201ENST00000580780 1647 ntBASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 HIST2H2BC-201ENST00000498492 580 ntBASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 AC022217.1-201ENST00000521069 738 ntBASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 CSH2-206ENST00000560142 749 ntTSL 5 BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 AC026740.1-201ENST00000607068 791 ntBASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 AL805961.1-203ENST00000641078 1258 ntBASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms