Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 AL162726.2-201ENST00000438986 1017 ntBASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 AC004233.3-201ENST00000607794 1269 ntBASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 AL022313.4-201ENST00000562756 2046 ntBASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
HDHD3Q9BSH5 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 DMBT1P1-203ENST00000636837 4628 ntBASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 PUDPP3-201ENST00000445368 636 ntBASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 BX088702.1-201ENST00000610784 235 ntBASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 ENPP7P14-201ENST00000621765 1040 ntBASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms