Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 GIMAP3P-201ENST00000495150 836 ntBASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 DUX4L27-201ENST00000554796 1261 ntBASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 AL691403.2-201ENST00000618460 490 ntBASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CMSS1Q9BQ75 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 SPDYE19P-201ENST00000338590 713 ntBASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 KLF2P2-201ENST00000416807 1039 ntBASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 AC004890.2-204ENST00000481968 304 ntBASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 TMEM198B-204ENST00000484016 896 ntBASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 RPL28-205ENST00000558131 444 ntTSL 5 BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 AP001972.5-201ENST00000624624 2338 ntBASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 BEND3P3-201ENST00000611030 2440 ntBASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms