Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.14□□□□□ -0.15
PKP4Q99569 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.14□□□□□ -0.15
PKP4Q99569 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.14□□□□□ -0.15
PKP4Q99569 TUBB8P8-201ENST00000458717 1058 ntBASIC14.14□□□□□ -0.15
PKP4Q99569 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PKP4Q99569 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.14□□□□□ -0.15
PKP4Q99569 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.14□□□□□ -0.15
PKP4Q99569 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.14□□□□□ -0.15
PKP4Q99569 AC104506.1-201ENST00000609247 429 ntBASIC14.14□□□□□ -0.15
PKP4Q99569 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.14□□□□□ -0.15
PKP4Q99569 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
PKP4Q99569 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.14□□□□□ -0.15
PKP4Q99569 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PKP4Q99569 AC136759.1-202ENST00000530858 2194 ntBASIC14.14□□□□□ -0.15
PKP4Q99569 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PKP4Q99569 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.14□□□□□ -0.15
PKP4Q99569 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PKP4Q99569 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PKP4Q99569 REXO1L6P-201ENST00000603433 1515 ntBASIC14.14□□□□□ -0.15
PKP4Q99569 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PKP4Q99569 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
PKP4Q99569 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PKP4Q99569 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PKP4Q99569 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PKP4Q99569 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.14□□□□□ -0.15
PKP4Q99569 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PKP4Q99569 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PKP4Q99569 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PKP4Q99569 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PKP4Q99569 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PKP4Q99569 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.13□□□□□ -0.15
PKP4Q99569 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PKP4Q99569 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PKP4Q99569 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PKP4Q99569 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.13□□□□□ -0.15
PKP4Q99569 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PKP4Q99569 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PKP4Q99569 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.13□□□□□ -0.15
PKP4Q99569 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.13□□□□□ -0.15
PKP4Q99569 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.13□□□□□ -0.15
PKP4Q99569 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PKP4Q99569 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PKP4Q99569 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.13□□□□□ -0.15
PKP4Q99569 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.13□□□□□ -0.15
PKP4Q99569 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PKP4Q99569 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PKP4Q99569 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
PKP4Q99569 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PKP4Q99569 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
PKP4Q99569 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PKP4Q99569 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PKP4Q99569 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PKP4Q99569 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PKP4Q99569 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.13□□□□□ -0.15
PKP4Q99569 RPL18P13-201ENST00000478088 569 ntBASIC14.13□□□□□ -0.15
PKP4Q99569 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.13□□□□□ -0.15
PKP4Q99569 AC006122.1-201ENST00000493323 440 ntBASIC14.13□□□□□ -0.15
PKP4Q99569 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.13□□□□□ -0.15
PKP4Q99569 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.13□□□□□ -0.15
PKP4Q99569 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.13□□□□□ -0.15
PKP4Q99569 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.13□□□□□ -0.15
PKP4Q99569 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.13□□□□□ -0.15
PKP4Q99569 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PKP4Q99569 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.13□□□□□ -0.15
PKP4Q99569 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.13□□□□□ -0.15
PKP4Q99569 MIR6752-201ENST00000618442 71 ntBASIC14.13□□□□□ -0.15
PKP4Q99569 AL023803.2-201ENST00000620080 638 ntBASIC14.13□□□□□ -0.15
PKP4Q99569 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.13□□□□□ -0.15
PKP4Q99569 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.13□□□□□ -0.15
PKP4Q99569 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PKP4Q99569 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PKP4Q99569 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PKP4Q99569 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PKP4Q99569 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PKP4Q99569 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PKP4Q99569 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
PKP4Q99569 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
PKP4Q99569 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.13□□□□□ -0.15
PKP4Q99569 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PKP4Q99569 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.13□□□□□ -0.15
PKP4Q99569 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PKP4Q99569 CYP4F23P-201ENST00000593402 1579 ntBASIC14.13□□□□□ -0.15
PKP4Q99569 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PKP4Q99569 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PKP4Q99569 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PKP4Q99569 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PKP4Q99569 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PKP4Q99569 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
PKP4Q99569 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PKP4Q99569 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PKP4Q99569 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PKP4Q99569 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.12□□□□□ -0.15
PKP4Q99569 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PKP4Q99569 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.12□□□□□ -0.15
PKP4Q99569 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PKP4Q99569 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
PKP4Q99569 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
PKP4Q99569 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PKP4Q99569 AC018735.1-201ENST00000437208 1502 ntBASIC14.12□□□□□ -0.15
PKP4Q99569 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms