Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 RN7SL692P-201ENST00000464677 288 ntBASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 LINC00567-201ENST00000569854 3409 ntBASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 HAL-202ENST00000538703 2637 ntTSL 2 BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 DFFBP1-201ENST00000433250 979 ntBASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 AC106760.1-201ENST00000508690 800 ntBASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 AL596325.1-201ENST00000563991 1082 ntBASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 AP001063.1-201ENST00000568332 529 ntBASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 BX088702.1-201ENST00000610784 235 ntBASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 AC025048.6-201ENST00000634326 1161 ntBASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 AL603764.1-201ENST00000636452 321 ntBASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 AL591122.2-201ENST00000624125 1853 ntBASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 AP003969.2-201ENST00000623739 2275 ntBASIC16.84■□□□□ 0.29
CHAMP1Q96JM3 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHAMP1Q96JM3 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CHAMP1Q96JM3 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CHAMP1Q96JM3 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC16.83■□□□□ 0.29
CHAMP1Q96JM3 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHAMP1Q96JM3 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHAMP1Q96JM3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHAMP1Q96JM3 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 ACKR1-201ENST00000368121 1240 ntBASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 RN7SKP175-201ENST00000408472 289 ntBASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 AL590640.2-201ENST00000457038 527 ntBASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms