Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 EIF3FP3-201ENST00000434851 1086 ntBASIC12.73□□□□□ -0.37
CPNE2Q96FN4 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 GNAQP1-201ENST00000444815 1067 ntBASIC12.73□□□□□ -0.37
CPNE2Q96FN4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 AL359711.2-201ENST00000563105 872 ntBASIC12.73□□□□□ -0.37
CPNE2Q96FN4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 AC106028.4-201ENST00000614509 607 ntBASIC12.73□□□□□ -0.37
CPNE2Q96FN4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 RN7SL832P-201ENST00000607781 1756 ntBASIC12.73□□□□□ -0.37
CPNE2Q96FN4 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 AL118506.1-201ENST00000601296 3082 ntBASIC12.73□□□□□ -0.37
CPNE2Q96FN4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 AL138725.1-201ENST00000407347 1314 ntBASIC12.72□□□□□ -0.37
CPNE2Q96FN4 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 INGX-202ENST00000489074 768 ntBASIC12.72□□□□□ -0.37
CPNE2Q96FN4 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 GCOM2-201ENST00000509133 1104 ntBASIC12.72□□□□□ -0.37
CPNE2Q96FN4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 KRT8P24-201ENST00000560290 1559 ntBASIC12.72□□□□□ -0.37
CPNE2Q96FN4 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CPNE2Q96FN4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms