Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
RFT1Q96AA3 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
RFT1Q96AA3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.95□□□□□ -0.34
RFT1Q96AA3 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.95□□□□□ -0.34
RFT1Q96AA3 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RFT1Q96AA3 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RFT1Q96AA3 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
RFT1Q96AA3 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
RFT1Q96AA3 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
RFT1Q96AA3 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
RFT1Q96AA3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
RFT1Q96AA3 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RFT1Q96AA3 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RFT1Q96AA3 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
RFT1Q96AA3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RFT1Q96AA3 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.95□□□□□ -0.34
RFT1Q96AA3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.95□□□□□ -0.34
RFT1Q96AA3 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.95□□□□□ -0.34
RFT1Q96AA3 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RFT1Q96AA3 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.95□□□□□ -0.34
RFT1Q96AA3 RN7SL832P-201ENST00000607781 1756 ntBASIC12.95□□□□□ -0.34
RFT1Q96AA3 PCDHB18P-202ENST00000526308 3197 ntBASIC12.95□□□□□ -0.34
RFT1Q96AA3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
RFT1Q96AA3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RFT1Q96AA3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RFT1Q96AA3 SPDYE19P-201ENST00000338590 713 ntBASIC12.95□□□□□ -0.34
RFT1Q96AA3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.95□□□□□ -0.34
RFT1Q96AA3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.95□□□□□ -0.34
RFT1Q96AA3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RFT1Q96AA3 RN7SL399P-201ENST00000471648 279 ntBASIC12.95□□□□□ -0.34
RFT1Q96AA3 AC093214.1-201ENST00000511688 1107 ntBASIC12.95□□□□□ -0.34
RFT1Q96AA3 AC026410.3-201ENST00000514280 936 ntBASIC12.95□□□□□ -0.34
RFT1Q96AA3 DOC2GP-202ENST00000514950 1163 ntBASIC12.95□□□□□ -0.34
RFT1Q96AA3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.95□□□□□ -0.34
RFT1Q96AA3 RARRES2P5-201ENST00000564013 466 ntBASIC12.95□□□□□ -0.34
RFT1Q96AA3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
RFT1Q96AA3 AL390955.2-201ENST00000603032 514 ntBASIC12.95□□□□□ -0.34
RFT1Q96AA3 AC139530.3-201ENST00000620344 690 ntBASIC12.95□□□□□ -0.34
RFT1Q96AA3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
RFT1Q96AA3 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
RFT1Q96AA3 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RFT1Q96AA3 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.95□□□□□ -0.34
RFT1Q96AA3 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RFT1Q96AA3 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.95□□□□□ -0.34
RFT1Q96AA3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RFT1Q96AA3 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RFT1Q96AA3 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RFT1Q96AA3 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
RFT1Q96AA3 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RFT1Q96AA3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.95□□□□□ -0.34
RFT1Q96AA3 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RFT1Q96AA3 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
RFT1Q96AA3 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RFT1Q96AA3 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RFT1Q96AA3 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.95□□□□□ -0.34
RFT1Q96AA3 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RFT1Q96AA3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RFT1Q96AA3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.95□□□□□ -0.34
RFT1Q96AA3 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RFT1Q96AA3 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RFT1Q96AA3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.95□□□□□ -0.34
RFT1Q96AA3 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
RFT1Q96AA3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RFT1Q96AA3 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RFT1Q96AA3 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RFT1Q96AA3 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RFT1Q96AA3 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RFT1Q96AA3 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RFT1Q96AA3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RFT1Q96AA3 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RFT1Q96AA3 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RFT1Q96AA3 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RFT1Q96AA3 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RFT1Q96AA3 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RFT1Q96AA3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 GNAQP1-201ENST00000444815 1067 ntBASIC12.94□□□□□ -0.34
RFT1Q96AA3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RFT1Q96AA3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RFT1Q96AA3 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RFT1Q96AA3 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms