Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 HLA-V-204ENST00000476601 1289 ntBASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 AL391069.4-201ENST00000609583 481 ntBASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 TEX28P1-201ENST00000613479 1221 ntBASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 TEX28P2-201ENST00000617764 1221 ntBASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 PI4KAP2-201ENST00000360806 2080 ntBASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 MSNP1-201ENST00000511640 1732 ntBASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 SPDYE7P-202ENST00000420373 878 ntBASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 AL161932.2-201ENST00000435436 679 ntBASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 AL513210.1-201ENST00000629608 234 ntBASIC12.41□□□□□ -0.42
SMIM4Q8WVI0 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms