Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 AGGF1P1-201ENST00000509500 2073 ntBASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 AC092135.3-201ENST00000624151 1846 ntBASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 KRT8P29-201ENST00000420409 1371 ntBASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 Z97180.1-201ENST00000445173 988 ntBASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 RN7SL769P-201ENST00000469386 295 ntBASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 AC015688.4-201ENST00000580780 1647 ntBASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 TUBBP5-203ENST00000508529 1334 ntBASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 AC131206.1-201ENST00000538078 1211 ntBASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC33Q8N5R6 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 AC091046.1-201ENST00000331871 207 ntBASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms