Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 AL022313.4-201ENST00000562756 2046 ntBASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 BOLA2P3-201ENST00000404566 256 ntBASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 AP006547.1-201ENST00000563435 692 ntBASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 AC132192.2-201ENST00000596206 1147 ntBASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.93□□□□□ -0.02
CDKL3Q8IVW4 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 PDIA3P1-201ENST00000471856 1510 ntBASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 PEG13-201ENST00000631594 5667 ntBASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 AC079316.1-201ENST00000548397 411 ntBASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 AC131212.3-201ENST00000624087 4219 ntBASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms