Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 AC139712.1-201ENST00000378256 1875 ntBASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 MIR1301-201ENST00000408518 82 ntBASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 AC073869.2-201ENST00000417338 1026 ntBASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 CYP4F36P-201ENST00000589193 186 ntBASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 AC004686.1-201ENST00000605113 538 ntBASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 AL118522.1-201ENST00000611368 560 ntBASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 TP53-221ENST00000615910 1149 ntTSL 5 BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 AC006504.5-208ENST00000588784 2401 ntBASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 KRT18P46-201ENST00000435568 1279 ntBASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 GOLGA2P7-209ENST00000560408 745 ntBASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 AC010976.2-201ENST00000609697 852 ntBASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.6■□□□□ 0.25
OTOP1Q7RTM1 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms