Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AL359091.4-201ENST00000610052 409 ntBASIC16.34■□□□□ 0.21
CCNA1P78396 AC002472.4-201ENST00000641915 272 ntBASIC16.34■□□□□ 0.21
CCNA1P78396 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCNA1P78396 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CCNA1P78396 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.34■□□□□ 0.21
CCNA1P78396 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCNA1P78396 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.34■□□□□ 0.21
CCNA1P78396 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCNA1P78396 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CCNA1P78396 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCNA1P78396 AGAP7P-201ENST00000582299 2062 ntBASIC16.34■□□□□ 0.21
CCNA1P78396 AGAP14-201ENST00000624701 2060 ntBASIC16.34■□□□□ 0.21
CCNA1P78396 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCNA1P78396 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCNA1P78396 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCNA1P78396 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCNA1P78396 MYO15B-237ENST00000642007 4893 ntBASIC16.34■□□□□ 0.21
CCNA1P78396 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCNA1P78396 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCNA1P78396 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CCNA1P78396 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCNA1P78396 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CCNA1P78396 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.33■□□□□ 0.21
CCNA1P78396 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CCNA1P78396 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCNA1P78396 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CCNA1P78396 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
CCNA1P78396 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CCNA1P78396 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCNA1P78396 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNA1P78396 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.33■□□□□ 0.2
CCNA1P78396 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNA1P78396 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNA1P78396 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNA1P78396 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC16.33■□□□□ 0.2
CCNA1P78396 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC16.33■□□□□ 0.2
CCNA1P78396 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCNA1P78396 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.33■□□□□ 0.2
CCNA1P78396 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCNA1P78396 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CCNA1P78396 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CCNA1P78396 AC244250.3-201ENST00000620749 366 ntBASIC16.33■□□□□ 0.2
CCNA1P78396 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC16.33■□□□□ 0.2
CCNA1P78396 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNA1P78396 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNA1P78396 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCNA1P78396 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC16.33■□□□□ 0.2
CCNA1P78396 AC064801.2-201ENST00000625052 1303 ntBASIC16.33■□□□□ 0.2
CCNA1P78396 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CCNA1P78396 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCNA1P78396 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.33■□□□□ 0.2
CCNA1P78396 AC025183.3-201ENST00000623526 1482 ntBASIC16.33■□□□□ 0.2
CCNA1P78396 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CCNA1P78396 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNA1P78396 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCNA1P78396 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNA1P78396 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.33■□□□□ 0.2
CCNA1P78396 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CCNA1P78396 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.33■□□□□ 0.2
CCNA1P78396 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCNA1P78396 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNA1P78396 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNA1P78396 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNA1P78396 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNA1P78396 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNA1P78396 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNA1P78396 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCNA1P78396 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNA1P78396 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNA1P78396 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNA1P78396 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNA1P78396 AC091951.1-201ENST00000512854 2465 ntBASIC16.33■□□□□ 0.2
CCNA1P78396 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.33■□□□□ 0.2
CCNA1P78396 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNA1P78396 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.32■□□□□ 0.2
CCNA1P78396 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNA1P78396 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNA1P78396 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNA1P78396 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNA1P78396 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNA1P78396 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCNA1P78396 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNA1P78396 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CCNA1P78396 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNA1P78396 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CCNA1P78396 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCNA1P78396 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNA1P78396 RNVU1-8-201ENST00000364272 125 ntBASIC16.32■□□□□ 0.2
CCNA1P78396 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNA1P78396 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNA1P78396 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNA1P78396 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.32■□□□□ 0.2
CCNA1P78396 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNA1P78396 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC16.32■□□□□ 0.2
CCNA1P78396 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCNA1P78396 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC16.32■□□□□ 0.2
CCNA1P78396 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCNA1P78396 AQP7P5-201ENST00000428759 1049 ntBASIC16.32■□□□□ 0.2
CCNA1P78396 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC16.32■□□□□ 0.2
CCNA1P78396 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms