Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 KRT18P13-201ENST00000400056 1290 ntBASIC13.34□□□□□ -0.27
CDC42P60953 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.34□□□□□ -0.27
CDC42P60953 AP006288.1-201ENST00000446065 395 ntBASIC13.34□□□□□ -0.27
CDC42P60953 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42P60953 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.34□□□□□ -0.27
CDC42P60953 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.34□□□□□ -0.27
CDC42P60953 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.34□□□□□ -0.27
CDC42P60953 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.34□□□□□ -0.27
CDC42P60953 RARRES2P5-201ENST00000564013 466 ntBASIC13.34□□□□□ -0.27
CDC42P60953 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.34□□□□□ -0.27
CDC42P60953 KRT18P8-201ENST00000581937 1246 ntBASIC13.34□□□□□ -0.27
CDC42P60953 AC138761.1-201ENST00000584393 385 ntBASIC13.34□□□□□ -0.27
CDC42P60953 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.34□□□□□ -0.27
CDC42P60953 AL662799.1-202ENST00000614205 422 ntBASIC13.34□□□□□ -0.27
CDC42P60953 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CDC42P60953 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42P60953 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42P60953 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42P60953 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42P60953 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CDC42P60953 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.34□□□□□ -0.27
CDC42P60953 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.34□□□□□ -0.27
CDC42P60953 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42P60953 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42P60953 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CDC42P60953 AL138725.1-201ENST00000407347 1314 ntBASIC13.34□□□□□ -0.27
CDC42P60953 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42P60953 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42P60953 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42P60953 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42P60953 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42P60953 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CDC42P60953 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CDC42P60953 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42P60953 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.33□□□□□ -0.27
CDC42P60953 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.33□□□□□ -0.27
CDC42P60953 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.33□□□□□ -0.27
CDC42P60953 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.33□□□□□ -0.27
CDC42P60953 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CDC42P60953 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CDC42P60953 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
CDC42P60953 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.33□□□□□ -0.27
CDC42P60953 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.27
CDC42P60953 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDC42P60953 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
CDC42P60953 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CDC42P60953 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.33□□□□□ -0.28
CDC42P60953 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CDC42P60953 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CDC42P60953 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CDC42P60953 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDC42P60953 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CDC42P60953 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDC42P60953 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.33□□□□□ -0.28
CDC42P60953 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.33□□□□□ -0.28
CDC42P60953 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CDC42P60953 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDC42P60953 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.33□□□□□ -0.28
CDC42P60953 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.33□□□□□ -0.28
CDC42P60953 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.33□□□□□ -0.28
CDC42P60953 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.33□□□□□ -0.28
CDC42P60953 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CDC42P60953 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDC42P60953 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.33□□□□□ -0.28
CDC42P60953 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CDC42P60953 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.33□□□□□ -0.28
CDC42P60953 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.33□□□□□ -0.28
CDC42P60953 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.33□□□□□ -0.28
CDC42P60953 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.33□□□□□ -0.28
CDC42P60953 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.33□□□□□ -0.28
CDC42P60953 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.33□□□□□ -0.28
CDC42P60953 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CDC42P60953 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CDC42P60953 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CDC42P60953 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.33□□□□□ -0.28
CDC42P60953 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDC42P60953 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.33□□□□□ -0.28
CDC42P60953 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CDC42P60953 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CDC42P60953 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CDC42P60953 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDC42P60953 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDC42P60953 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.33□□□□□ -0.28
CDC42P60953 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CDC42P60953 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CDC42P60953 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CDC42P60953 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42P60953 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CDC42P60953 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42P60953 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42P60953 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42P60953 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42P60953 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42P60953 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42P60953 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
CDC42P60953 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42P60953 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
CDC42P60953 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42P60953 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42P60953 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms